Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.28□□□□□ -1.723e-6■■□□□ 13
SFPQP23246 ARID1B-235ENST00000638000 1401 ntTSL 59.64□□□□□ -0.872e-6■■□□□ 13
SFPQP23246 NFAT5-210ENST00000567990 2855 ntTSL 517.39■□□□□ 0.379e-7■■□□□ 13
SFPQP23246 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.149e-7■■□□□ 13
SFPQP23246 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.959e-7■■□□□ 13
SFPQP23246 NFAT5-204ENST00000426654 14219 ntTSL 1 (best)9.09□□□□□ -0.959e-7■■□□□ 13
SFPQP23246 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.039e-7■■□□□ 13
SFPQP23246 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.159e-7■■□□□ 13
SFPQP23246 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.44□□□□□ -1.389e-7■■□□□ 13
SFPQP23246 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.619e-7■■□□□ 13
SFPQP23246 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.531e-6■■□□□ 12.9
SFPQP23246 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.531e-6■■□□□ 12.9
SFPQP23246 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.531e-6■■□□□ 12.9
SFPQP23246 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.312e-7■■□□□ 12.9
SFPQP23246 CAPN15-206ENST00000568402 540 ntTSL 415.94■□□□□ 0.142e-7■■□□□ 12.9
SFPQP23246 DEAF1-206ENST00000526857 567 ntTSL 315.64■□□□□ 0.092e-7■■□□□ 12.9
SFPQP23246 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC15.32■□□□□ 0.042e-7■■□□□ 12.9
SFPQP23246 DEAF1-203ENST00000525626 585 ntTSL 315.14■□□□□ 0.012e-7■■□□□ 12.9
SFPQP23246 ACTN1-208ENST00000553370 605 ntTSL 311.16□□□□□ -0.622e-7■■□□□ 12.9
SFPQP23246 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.97■□□□□ 0.633e-6■■□□□ 12.9
SFPQP23246 STK24-206ENST00000481288 656 ntTSL 317.23■□□□□ 0.353e-6■■□□□ 12.9
SFPQP23246 STK24-207ENST00000491878 547 ntTSL 416.42■□□□□ 0.223e-6■■□□□ 12.9
SFPQP23246 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.343e-6■■□□□ 12.9
SFPQP23246 SCARB1-206ENST00000539320 720 ntTSL 224.87■■□□□ 1.572e-6■■□□□ 12.9
SFPQP23246 SCARB1-210ENST00000545493 581 ntTSL 223.65■■□□□ 1.382e-6■■□□□ 12.9
SFPQP23246 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.97■■□□□ 1.272e-6■■□□□ 12.9
SFPQP23246 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.182e-6■■□□□ 12.9
SFPQP23246 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.87■□□□□ 0.932e-6■■□□□ 12.9
SFPQP23246 SCARB1-205ENST00000538291 5527 ntTSL 519.5■□□□□ 0.712e-6■■□□□ 12.9
SFPQP23246 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.78■□□□□ 0.62e-6■■□□□ 12.9
SFPQP23246 SCARB1-207ENST00000541661 476 ntTSL 514.73□□□□□ -0.052e-6■■□□□ 12.9
SFPQP23246 SCARB1-204ENST00000535005 1845 ntTSL 1 (best)13.42□□□□□ -0.262e-6■■□□□ 12.9
SFPQP23246 SOX5-211ENST00000538083 617 ntTSL 49.82□□□□□ -0.842e-6■■□□□ 12.8
SFPQP23246 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.52□□□□□ -2.018e-9■■□□□ 12.8
SFPQP23246 PVT1-204ENST00000517525 392 ntTSL 327.47■■□□□ 1.994e-6■■□□□ 12.8
SFPQP23246 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.55■■□□□ 1.844e-6■■□□□ 12.8
SFPQP23246 ROCK2-201ENST00000261535 1795 ntTSL 524.77■■□□□ 1.564e-7■■□□□ 12.8
SFPQP23246 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.214e-7■■□□□ 12.8
SFPQP23246 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.34■□□□□ 0.694e-7■■□□□ 12.8
SFPQP23246 ROCK2-206ENST00000462366 563 ntTSL 36.02□□□□□ -1.454e-7■■□□□ 12.8
SFPQP23246 CBFA2T2-207ENST00000471007 712 ntTSL 223.42■■□□□ 1.343e-6■■□□□ 12.8
SFPQP23246 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.083e-6■■□□□ 12.8
SFPQP23246 CBFA2T2-205ENST00000375279 7617 ntTSL 5 BASIC13.48□□□□□ -0.253e-6■■□□□ 12.8
SFPQP23246 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.649e-7■■□□□ 12.8
SFPQP23246 TMEM37-204ENST00000465296 820 ntTSL 318.39■□□□□ 0.539e-7■■□□□ 12.8
SFPQP23246 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.05■□□□□ 0.489e-7■■□□□ 12.8
SFPQP23246 TMEM37-203ENST00000417645 522 ntTSL 316.76■□□□□ 0.279e-7■■□□□ 12.8
SFPQP23246 SOX5-208ENST00000536850 606 ntTSL 34.64□□□□□ -1.672e-6■■□□□ 12.8
SFPQP23246 SEPT9-221ENST00000588958 879 ntTSL 218.14■□□□□ 0.499e-7■■□□□ 12.8
SFPQP23246 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.419e-7■■□□□ 12.8
SFPQP23246 SEPT9-212ENST00000586128 752 ntTSL 415.42■□□□□ 0.069e-7■■□□□ 12.8
SFPQP23246 SEPT9-239ENST00000591704 749 ntTSL 213.12□□□□□ -0.319e-7■■□□□ 12.8
SFPQP23246 AC092139.4-201ENST00000624318 2794 ntBASIC14.86□□□□□ -0.031e-6■■□□□ 12.7
SFPQP23246 CTBP1-205ENST00000504092 920 ntTSL 521.18■□□□□ 0.983e-6■■□□□ 12.7
SFPQP23246 CTBP1-210ENST00000510739 774 ntTSL 317.83■□□□□ 0.443e-6■■□□□ 12.7
SFPQP23246 CTBP1-206ENST00000504784 418 ntTSL 315.78■□□□□ 0.123e-6■■□□□ 12.7
SFPQP23246 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC10.12□□□□□ -0.792e-6■■□□□ 12.7
SFPQP23246 ELF1-202ENST00000405737 903 ntTSL 218.99■□□□□ 0.632e-11■■□□□ 12.7
SFPQP23246 CUX1-218ENST00000560541 3176 ntTSL 513.07□□□□□ -0.322e-6■■□□□ 12.7
SFPQP23246 PTBP1-209ENST00000586481 578 ntTSL 322.18■■□□□ 1.144e-7■■□□□ 12.7
SFPQP23246 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC22.16■■□□□ 1.144e-7■■□□□ 12.7
SFPQP23246 PTBP1-210ENST00000586944 4661 ntTSL 220.22■□□□□ 0.834e-7■■□□□ 12.7
SFPQP23246 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.434e-7■■□□□ 12.7
SFPQP23246 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.72■□□□□ 0.434e-7■■□□□ 12.7
SFPQP23246 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.44e-7■■□□□ 12.7
SFPQP23246 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.71■□□□□ 0.274e-7■■□□□ 12.7
SFPQP23246 PTBP1-214ENST00000589575 749 ntTSL 314.62□□□□□ -0.074e-7■■□□□ 12.7
SFPQP23246 PTBP1-216ENST00000590887 642 ntTSL 314.23□□□□□ -0.134e-7■■□□□ 12.7
SFPQP23246 PTBP1-213ENST00000587191 357 ntTSL 512.86□□□□□ -0.354e-7■■□□□ 12.7
SFPQP23246 EVA1A-211ENST00000490746 589 ntTSL 519.6■□□□□ 0.732e-6■■□□□ 12.7
SFPQP23246 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.94■□□□□ 0.622e-6■■□□□ 12.7
SFPQP23246 EVA1A-208ENST00000485891 479 ntTSL 518.47■□□□□ 0.552e-6■■□□□ 12.7
SFPQP23246 EVA1A-206ENST00000432649 569 ntAPPRIS ALT2 TSL 317.08■□□□□ 0.322e-6■■□□□ 12.7
SFPQP23246 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.182e-6■■□□□ 12.7
SFPQP23246 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.042e-6■■□□□ 12.7
SFPQP23246 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.092e-6■■□□□ 12.7
SFPQP23246 EVA1A-210ENST00000486696 585 ntTSL 37.62□□□□□ -1.192e-6■■□□□ 12.7
SFPQP23246 CTBP1-216ENST00000514669 809 ntTSL 319■□□□□ 0.633e-6■■□□□ 12.7
SFPQP23246 CTBP1-207ENST00000505826 657 ntTSL 519■□□□□ 0.633e-6■■□□□ 12.7
SFPQP23246 ASS1-205ENST00000422569 807 ntTSL 523.83■■□□□ 1.411e-8■■□□□ 12.6
SFPQP23246 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.392e-8■■□□□ 12.6
SFPQP23246 SGPL1-204ENST00000486993 537 ntTSL 1 (best)23.01■■□□□ 1.271e-8■■□□□ 12.6
SFPQP23246 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.461e-8■■□□□ 12.6
SFPQP23246 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.131e-8■■□□□ 12.6
SFPQP23246 ZNF652-203ENST00000508237 4543 ntTSL 215.04■□□□□ -02e-8■■□□□ 12.6
SFPQP23246 SGPL1-202ENST00000373202 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.331e-8■■□□□ 12.6
SFPQP23246 ASS1-201ENST00000352480 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.331e-8■■□□□ 12.6
SFPQP23246 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.142e-8■■□□□ 12.6
SFPQP23246 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.258e-7■■□□□ 12.6
SFPQP23246 IGF2BP2-205ENST00000461957 509 ntTSL 515.37■□□□□ 0.058e-7■■□□□ 12.6
SFPQP23246 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.058e-7■■□□□ 12.6
SFPQP23246 IGF2BP2-201ENST00000346192 3291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.158e-7■■□□□ 12.6
SFPQP23246 IGF2BP2-203ENST00000421047 1711 ntTSL 1 (best) BASIC14.13□□□□□ -0.158e-7■■□□□ 12.6
SFPQP23246 IGF2BP2-208ENST00000466476 469 ntTSL 213.73□□□□□ -0.218e-7■■□□□ 12.6
SFPQP23246 IGF2BP2-209ENST00000493302 358 ntTSL 57.69□□□□□ -1.188e-7■■□□□ 12.6
SFPQP23246 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.992e-6■■□□□ 12.6
SFPQP23246 OAZ1-210ENST00000593012 1357 ntTSL 220.35■□□□□ 0.852e-6■■□□□ 12.6
SFPQP23246 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.772e-6■■□□□ 12.6
SFPQP23246 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.622e-6■■□□□ 12.6
SFPQP23246 OAZ1-201ENST00000581150 1131 ntTSL 518.5■□□□□ 0.552e-6■■□□□ 12.6
Retrieved 100 of 4,991 protein–RNA pairs in 84.8 ms