Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 DDX5-228ENST00000584279 676 ntTSL 321.4■■□□□ 1.025e-8■□□□□ 9
EIF3DO15371 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.29■□□□□ 0.525e-8■□□□□ 9
EIF3DO15371 DDX5-220ENST00000581806 576 ntTSL 417.67■□□□□ 0.425e-8■□□□□ 9
EIF3DO15371 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.415e-8■□□□□ 9
EIF3DO15371 DDX5-219ENST00000581697 580 ntTSL 516.67■□□□□ 0.265e-8■□□□□ 9
EIF3DO15371 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.89■□□□□ 0.135e-8■□□□□ 9
EIF3DO15371 DDX5-207ENST00000578400 575 ntTSL 515.14■□□□□ 0.015e-8■□□□□ 9
EIF3DO15371 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC14.34□□□□□ -0.115e-8■□□□□ 9
EIF3DO15371 DDX5-218ENST00000581693 2156 ntTSL 512.8□□□□□ -0.365e-8■□□□□ 9
EIF3DO15371 DDX5-203ENST00000540698 2225 ntTSL 512.58□□□□□ -0.45e-8■□□□□ 9
EIF3DO15371 DDX5-224ENST00000583239 474 ntTSL 412.54□□□□□ -0.45e-8■□□□□ 9
EIF3DO15371 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC12.3□□□□□ -0.445e-8■□□□□ 9
EIF3DO15371 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC11.58□□□□□ -0.565e-8■□□□□ 9
EIF3DO15371 DDX5-231ENST00000585060 572 ntTSL 410.15□□□□□ -0.785e-8■□□□□ 9
EIF3DO15371 DDX5-215ENST00000581230 3558 ntTSL 28.6□□□□□ -1.035e-8■□□□□ 9
EIF3DO15371 DDX5-206ENST00000578190 582 ntTSL 38.4□□□□□ -1.065e-8■□□□□ 9
EIF3DO15371 TTC21B-203ENST00000464374 1844 ntTSL 1 (best)7.48□□□□□ -1.215e-8■□□□□ 9
EIF3DO15371 DDX5-211ENST00000579091 531 ntTSL 47.22□□□□□ -1.255e-8■□□□□ 9
EIF3DO15371 DDX5-225ENST00000583562 465 ntTSL 1 (best)6.49□□□□□ -1.375e-8■□□□□ 9
EIF3DO15371 DDX5-223ENST00000583212 543 ntTSL 45.3□□□□□ -1.565e-8■□□□□ 9
EIF3DO15371 KTN1-210ENST00000553624 731 ntTSL 54.21□□□□□ -1.745e-8■□□□□ 9
EIF3DO15371 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.03□□□□□ -2.085e-8■□□□□ 9
EIF3DO15371 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC27.19■■□□□ 1.944e-8■□□□□ 9
EIF3DO15371 HIF1A-206ENST00000553999 616 ntTSL 422.27■■□□□ 1.164e-8■□□□□ 9
EIF3DO15371 TMEM33-201ENST00000264452 1570 ntTSL 1 (best)22.14■■□□□ 1.134e-8■□□□□ 9
EIF3DO15371 HIF1A-211ENST00000557446 559 ntTSL 521.5■■□□□ 1.034e-8■□□□□ 9
EIF3DO15371 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.634e-8■□□□□ 9
EIF3DO15371 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.343e-15■□□□□ 9
EIF3DO15371 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.323e-15■□□□□ 9
EIF3DO15371 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.75■□□□□ 0.273e-15■□□□□ 9
EIF3DO15371 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.063e-15■□□□□ 9
EIF3DO15371 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.114e-8■□□□□ 9
EIF3DO15371 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.354e-8■□□□□ 9
EIF3DO15371 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.374e-8■□□□□ 9
EIF3DO15371 MDH1-213ENST00000485781 893 ntTSL 212.11□□□□□ -0.474e-8■□□□□ 9
EIF3DO15371 MDH1-202ENST00000409476 808 ntTSL 5 BASIC11.74□□□□□ -0.534e-8■□□□□ 9
EIF3DO15371 MDH1-203ENST00000409908 700 ntTSL 3 BASIC11.74□□□□□ -0.534e-8■□□□□ 9
EIF3DO15371 TMEM33-202ENST00000325094 6221 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.564e-8■□□□□ 9
EIF3DO15371 TMEM33-205ENST00000508448 867 ntTSL 511.31□□□□□ -0.64e-8■□□□□ 9
EIF3DO15371 HIF1A-203ENST00000394997 3922 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.64e-8■□□□□ 9
EIF3DO15371 MDH1-216ENST00000544381 1346 ntTSL 2 BASIC11.04□□□□□ -0.644e-8■□□□□ 9
EIF3DO15371 TMEM33-203ENST00000504986 7482 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.664e-8■□□□□ 9
EIF3DO15371 MDH1-201ENST00000233114 1650 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.674e-8■□□□□ 9
EIF3DO15371 HIF1A-202ENST00000337138 3919 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.684e-8■□□□□ 9
EIF3DO15371 MDH1-215ENST00000539945 1443 ntTSL 2 BASIC10.67□□□□□ -0.74e-8■□□□□ 9
EIF3DO15371 MDH1-205ENST00000432309 844 ntTSL 59.73□□□□□ -0.854e-8■□□□□ 9
EIF3DO15371 MDH1-206ENST00000436321 680 ntTSL 37.98□□□□□ -1.134e-8■□□□□ 9
EIF3DO15371 STMN1-205ENST00000446334 665 ntTSL 26.66□□□□□ -1.343e-15■□□□□ 9
EIF3DO15371 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.373e-15■□□□□ 9
EIF3DO15371 MDH1-208ENST00000454035 575 ntTSL 36.4□□□□□ -1.384e-8■□□□□ 9
EIF3DO15371 MDH1-210ENST00000472098 936 ntTSL 1 (best)6.02□□□□□ -1.454e-8■□□□□ 9
EIF3DO15371 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.514e-8■□□□□ 9
EIF3DO15371 MDH1-207ENST00000442225 785 ntTSL 54.57□□□□□ -1.684e-8■□□□□ 9
EIF3DO15371 MDH1-212ENST00000485155 571 ntTSL 1 (best)4.47□□□□□ -1.694e-8■□□□□ 9
EIF3DO15371 STMN1-207ENST00000465604 2947 ntTSL 1 (best)3.69□□□□□ -1.823e-15■□□□□ 9
EIF3DO15371 MDH1-204ENST00000421012 573 ntTSL 42.4□□□□□ -2.034e-8■□□□□ 9
EIF3DO15371 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.111e-7■□□□□ 8.9
EIF3DO15371 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.331e-7■□□□□ 8.9
EIF3DO15371 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.353e-6■□□□□ 8.9
EIF3DO15371 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.942e-6■□□□□ 8.9
EIF3DO15371 NONO-203ENST00000373856 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.173e-8■□□□□ 8.9
EIF3DO15371 NONO-202ENST00000373841 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.333e-8■□□□□ 8.9
EIF3DO15371 NONO-211ENST00000473525 1430 ntTSL 511.71□□□□□ -0.533e-8■□□□□ 8.9
EIF3DO15371 NONO-201ENST00000276079 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.673e-8■□□□□ 8.9
EIF3DO15371 NONO-215ENST00000535149 2882 ntTSL 2 BASIC10.65□□□□□ -0.73e-8■□□□□ 8.9
EIF3DO15371 NONO-205ENST00000418921 703 ntTSL 510.24□□□□□ -0.773e-8■□□□□ 8.9
EIF3DO15371 NONO-212ENST00000474431 644 ntTSL 58.42□□□□□ -1.063e-8■□□□□ 8.9
EIF3DO15371 NONO-214ENST00000490044 3215 ntTSL 27.43□□□□□ -1.223e-8■□□□□ 8.9
EIF3DO15371 NONO-210ENST00000472185 397 ntTSL 56.95□□□□□ -1.33e-8■□□□□ 8.9
EIF3DO15371 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.15e-8■□□□□ 8.9
EIF3DO15371 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.315e-8■□□□□ 8.9
EIF3DO15371 OGT-210ENST00000488174 7243 ntTSL 56.4□□□□□ -1.395e-8■□□□□ 8.9
EIF3DO15371 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.615e-6■□□□□ 8.9
EIF3DO15371 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.66■■□□□ 1.385e-6■□□□□ 8.9
EIF3DO15371 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.66■■□□□ 1.385e-6■□□□□ 8.9
EIF3DO15371 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.275e-6■□□□□ 8.9
EIF3DO15371 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.195e-6■□□□□ 8.9
EIF3DO15371 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.175e-6■□□□□ 8.9
EIF3DO15371 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.91■■□□□ 1.15e-6■□□□□ 8.9
EIF3DO15371 FAM207A-203ENST00000458015 643 ntTSL 521.86■■□□□ 1.095e-6■□□□□ 8.9
EIF3DO15371 SNX17-202ENST00000427123 2007 ntTSL 221.17■□□□□ 0.985e-6■□□□□ 8.9
EIF3DO15371 SNX17-203ENST00000440760 1955 ntTSL 1 (best)21.05■□□□□ 0.965e-6■□□□□ 8.9
EIF3DO15371 SNX17-206ENST00000484886 568 ntTSL 220.8■□□□□ 0.925e-6■□□□□ 8.9
EIF3DO15371 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.915e-6■□□□□ 8.9
EIF3DO15371 IL4I1-208ENST00000601717 2261 ntTSL 1 (best)20.71■□□□□ 0.915e-6■□□□□ 8.9
EIF3DO15371 HNRNPM-204ENST00000594907 1078 ntTSL 520.53■□□□□ 0.885e-6■□□□□ 8.9
EIF3DO15371 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.885e-6■□□□□ 8.9
EIF3DO15371 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.875e-6■□□□□ 8.9
EIF3DO15371 HNRNPM-213ENST00000600092 1086 ntTSL 220.12■□□□□ 0.815e-6■□□□□ 8.9
EIF3DO15371 HNRNPM-206ENST00000596984 664 ntTSL 520.12■□□□□ 0.815e-6■□□□□ 8.9
EIF3DO15371 ATP6V1H-205ENST00000519588 578 ntTSL 420.06■□□□□ 0.85e-6■□□□□ 8.9
EIF3DO15371 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.99■□□□□ 0.795e-6■□□□□ 8.9
EIF3DO15371 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.775e-6■□□□□ 8.9
EIF3DO15371 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.745e-6■□□□□ 8.9
EIF3DO15371 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.695e-6■□□□□ 8.9
EIF3DO15371 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.16■□□□□ 0.665e-6■□□□□ 8.9
EIF3DO15371 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.635e-6■□□□□ 8.9
EIF3DO15371 CHRD-208ENST00000460627 4719 ntTSL 218.95■□□□□ 0.625e-6■□□□□ 8.9
EIF3DO15371 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.65e-6■□□□□ 8.9
EIF3DO15371 SNX17-209ENST00000494893 966 ntTSL 218.66■□□□□ 0.585e-6■□□□□ 8.9
Retrieved 100 of 4,069 protein–RNA pairs in 25.5 ms