RNA–Protein interactions for RNA: ENST00000553624.5

KTN1-210, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-210ENST00000553624 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.29
KTN1-210ENST00000553624 CHIC1Q5VXU3 224 aa21.98■■□□□ 1.11
KTN1-210ENST00000553624 SENP3Q9H4L4 574 aaPredicted RBP19.76■□□□□ 0.75
KTN1-210ENST00000553624 PHF23Q9BUL5 403 aaPredicted RBP19.49■□□□□ 0.71
KTN1-210ENST00000553624 FOXD1Q16676 465 aa18.41■□□□□ 0.54
KTN1-210ENST00000553624 PLPPR3Q6T4P5 718 aa17.82■□□□□ 0.44
KTN1-210ENST00000553624 MSH5O43196 834 aa17.23■□□□□ 0.35
KTN1-210ENST00000553624 PIAS4Q8N2W9 510 aaPredicted RBP17.22■□□□□ 0.35
KTN1-210ENST00000553624 PPP6R1Q9UPN7 881 aa17.2■□□□□ 0.34
KTN1-210ENST00000553624 ADRA2BP18089 450 aa17.16■□□□□ 0.34
KTN1-210ENST00000553624 POTEDQ86YR6 584 aa16.81■□□□□ 0.28
KTN1-210ENST00000553624 MAPK8IP2Q13387 824 aaPredicted RBP15.76■□□□□ 0.11
KTN1-210ENST00000553624 SCAF1Q9H7N4 1312 aaKnown RBP15.71■□□□□ 0.11
KTN1-210ENST00000553624 PPP4R3CPQ6ZMV5 832 aa15.69■□□□□ 0.1
KTN1-210ENST00000553624 DMRT2Q9Y5R5 561 aa15.66■□□□□ 0.1
KTN1-210ENST00000553624 KCNA4P22459 653 aa15.4■□□□□ 0.06
KTN1-210ENST00000553624 NCBP3Q53F19 620 aaKnown RBP15.34■□□□□ 0.05
KTN1-210ENST00000553624 CNKSR2Q8WXI2 1034 aa15.25■□□□□ 0.03
KTN1-210ENST00000553624 HOXD11P31277 338 aaPredicted RBP15.08■□□□□ 0
KTN1-210ENST00000553624 NPM3O75607 178 aaKnown RBP15.07■□□□□ 0
KTN1-210ENST00000553624 DCAF8L1A6NGE4 600 aa15.05■□□□□ -0
KTN1-210ENST00000553624 RNF216Q9NWF9 866 aaPredicted RBP14.97□□□□□ -0.01
KTN1-210ENST00000553624 CACNB1Q02641 598 aaPredicted RBP14.8□□□□□ -0.04
KTN1-210ENST00000553624 SLC4A1APQ9BWU0 796 aaKnown RBP14.71□□□□□ -0.05
KTN1-210ENST00000553624 RNF39Q9H2S5 420 aa14.69□□□□□ -0.06
KTN1-210ENST00000553624 DNAJC5BQ9UF47 199 aa14.58□□□□□ -0.08
KTN1-210ENST00000553624 C1QBPQ07021 282 aaKnown RBP14.48□□□□□ -0.09
KTN1-210ENST00000553624 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.39□□□□□ -0.11
KTN1-210ENST00000553624 EHMT2Q96KQ7 1210 aa14.38□□□□□ -0.11
KTN1-210ENST00000553624 SLC4A2P04920 1241 aa14.19□□□□□ -0.14
KTN1-210ENST00000553624 FOXD4L1Q9NU39 408 aa14.18□□□□□ -0.14
KTN1-210ENST00000553624 ZBTB22O15209 634 aa14.14□□□□□ -0.15
KTN1-210ENST00000553624 CSRNP3Q8WYN3 585 aa14.11□□□□□ -0.15
KTN1-210ENST00000553624 U3KPZ7 1027 aaPredicted RBP14.08□□□□□ -0.16
KTN1-210ENST00000553624 MYCNP04198 464 aaPredicted RBP13.96□□□□□ -0.17
KTN1-210ENST00000553624 SPINK5Q9NQ38 1064 aaPredicted RBP13.88□□□□□ -0.19
KTN1-210ENST00000553624 CAPN15O75808 1086 aa13.87□□□□□ -0.19
KTN1-210ENST00000553624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.82□□□□□ -0.2
KTN1-210ENST00000553624 HNRNPUL2Q1KMD3 747 aaKnown RBP13.82□□□□□ -0.2
KTN1-210ENST00000553624 SAMD1Q6SPF0 538 aaPredicted RBP13.77□□□□□ -0.21
KTN1-210ENST00000553624 DSG3P32926 999 aa13.76□□□□□ -0.21
KTN1-210ENST00000553624 APLP2Q06481 763 aa13.7□□□□□ -0.22
KTN1-210ENST00000553624 ATXN8OSP0DMR3 200 aa13.66□□□□□ -0.22
KTN1-210ENST00000553624 TRHP20396 242 aaPredicted RBP13.65□□□□□ -0.22
KTN1-210ENST00000553624 ZNF219Q9P2Y4 722 aaPredicted RBP13.61□□□□□ -0.23
KTN1-210ENST00000553624 ABCB7O75027 752 aa13.55□□□□□ -0.24
KTN1-210ENST00000553624 ATF5Q9Y2D1 282 aaPredicted RBP13.52□□□□□ -0.25
KTN1-210ENST00000553624 POLA2Q14181 598 aa13.27□□□□□ -0.29
KTN1-210ENST00000553624 POTEHQ6S545 545 aa13.18□□□□□ -0.3
KTN1-210ENST00000553624 RBM42Q9BTD8 480 aaKnown RBP13.15□□□□□ -0.3
KTN1-210ENST00000553624 ZBTB12Q9Y330 459 aaPredicted RBP13.06□□□□□ -0.32
KTN1-210ENST00000553624 FBLN2P98095 1184 aa13.03□□□□□ -0.32
KTN1-210ENST00000553624 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
KTN1-210ENST00000553624 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
KTN1-210ENST00000553624 OSCARQ8IYS5 282 aa12.85□□□□□ -0.35
KTN1-210ENST00000553624 AKT1S1Q96B36 256 aa12.84□□□□□ -0.35
KTN1-210ENST00000553624 FKBP8Q14318 412 aa12.81□□□□□ -0.36
KTN1-210ENST00000553624 SPDYE4A6NLX3 237 aa12.73□□□□□ -0.37
KTN1-210ENST00000553624 REM2Q8IYK8 340 aaPredicted RBP12.71□□□□□ -0.37
KTN1-210ENST00000553624 SPDYE2BA6NHP3 402 aa12.68□□□□□ -0.38
KTN1-210ENST00000553624 SPDYE6P0CI01 402 aa12.68□□□□□ -0.38
KTN1-210ENST00000553624 SPDYE2Q495Y8 402 aa12.68□□□□□ -0.38
KTN1-210ENST00000553624 ZNF692Q9BU19 519 aaPredicted RBP12.64□□□□□ -0.39
KTN1-210ENST00000553624 PITPNM1O00562 1244 aa12.59□□□□□ -0.39
KTN1-210ENST00000553624 SSUH2Q9Y2M2 353 aa12.56□□□□□ -0.4
KTN1-210ENST00000553624 PIP4P2Q8N4L2 257 aa12.54□□□□□ -0.4
KTN1-210ENST00000553624 PABPN1Q86U42 306 aaKnown RBP eCLIP12.48□□□□□ -0.41
KTN1-210ENST00000553624 PROM2Q8N271 834 aa12.47□□□□□ -0.41
KTN1-210ENST00000553624 FXR2P51116 673 aaKnown RBP eCLIP12.46□□□□□ -0.418e-8■■□□□ 12.1
KTN1-210ENST00000553624 SPDYE1Q8NFV5 336 aaPredicted RBP12.38□□□□□ -0.43
KTN1-210ENST00000553624 CLEC11AQ9Y240 323 aa12.38□□□□□ -0.43
KTN1-210ENST00000553624 SP7Q8TDD2 431 aaPredicted RBP12.36□□□□□ -0.43
KTN1-210ENST00000553624 FBXO3Q9UK99 471 aa12.35□□□□□ -0.43
KTN1-210ENST00000553624 HAX1O00165 279 aa12.33□□□□□ -0.44
KTN1-210ENST00000553624 STAG3Q9UJ98 1225 aa12.29□□□□□ -0.44
KTN1-210ENST00000553624 PRKAR2AP13861 404 aaKnown RBP12.27□□□□□ -0.45
KTN1-210ENST00000553624 VASPP50552 380 aaPredicted RBP12.17□□□□□ -0.46
KTN1-210ENST00000553624 PRR29P0C7W0 189 aa12.16□□□□□ -0.46
KTN1-210ENST00000553624 EVX2Q03828 476 aa12.16□□□□□ -0.46
KTN1-210ENST00000553624 CHADLQ6NUI6 762 aa12.13□□□□□ -0.47
KTN1-210ENST00000553624 PLCD3Q8N3E9 789 aa12.09□□□□□ -0.47
KTN1-210ENST00000553624 C19orf67A6NJJ6 358 aa12.07□□□□□ -0.48
KTN1-210ENST00000553624 MIER1Q8N108 512 aa12.07□□□□□ -0.48
KTN1-210ENST00000553624 PLEKHG5O94827 1062 aa12.06□□□□□ -0.48
KTN1-210ENST00000553624 KLHL34Q8N239 644 aa11.97□□□□□ -0.49
KTN1-210ENST00000553624 CREBZFQ9NS37 354 aa11.97□□□□□ -0.49
KTN1-210ENST00000553624 IFNLR1Q8IU57 520 aaPredicted RBP11.96□□□□□ -0.49
KTN1-210ENST00000553624 ZBTB47Q9UFB7 747 aaPredicted RBP11.95□□□□□ -0.5
KTN1-210ENST00000553624 FARP1Q9Y4F1 1045 aaPredicted RBP11.94□□□□□ -0.5
KTN1-210ENST00000553624 GABBR2O75899 941 aa11.89□□□□□ -0.51
KTN1-210ENST00000553624 CD44P16070 742 aaKnown RBP11.88□□□□□ -0.51
KTN1-210ENST00000553624 SPOCK2Q92563 424 aa11.85□□□□□ -0.51
KTN1-210ENST00000553624 NPM1P06748 294 aaKnown RBP eCLIP11.82□□□□□ -0.52
KTN1-210ENST00000553624 MNX1P50219 401 aaPredicted RBP11.82□□□□□ -0.52
KTN1-210ENST00000553624 AMER1Q5JTC6 1135 aaPredicted RBP11.8□□□□□ -0.52
KTN1-210ENST00000553624 RTN4Q9NQC3 1192 aaKnown RBP11.73□□□□□ -0.53
KTN1-210ENST00000553624 NUBP1P53384 320 aa11.71□□□□□ -0.53
KTN1-210ENST00000553624 ZRANB1Q9UGI0 708 aa11.71□□□□□ -0.53
KTN1-210ENST00000553624 CLCN6P51797 869 aa11.7□□□□□ -0.54
KTN1-210ENST00000553624 ZNF579Q8NAF0 562 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms