RNA–Protein interactions for RNA: ENST00000554507.5

KTN1-214, Transcript of kinectin 1, humanhuman

TSL 1 (best) BASIC

Gene KTN1, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-214ENST00000554507 AEBP2Q6ZN18 517 aaPredicted RBP14.12□□□□□ -0.15
KTN1-214ENST00000554507 CHIC1Q5VXU3 224 aa13.26□□□□□ -0.29
KTN1-214ENST00000554507 SENP3Q9H4L4 574 aaPredicted RBP12.02□□□□□ -0.48
KTN1-214ENST00000554507 PHF23Q9BUL5 403 aaPredicted RBP11.86□□□□□ -0.51
KTN1-214ENST00000554507 POTEDQ86YR6 584 aa11.46□□□□□ -0.57
KTN1-214ENST00000554507 FOXD1Q16676 465 aa11.25□□□□□ -0.61
KTN1-214ENST00000554507 MSH5O43196 834 aa10.56□□□□□ -0.72
KTN1-214ENST00000554507 PLPPR3Q6T4P5 718 aa10.5□□□□□ -0.73
KTN1-214ENST00000554507 PIAS4Q8N2W9 510 aaPredicted RBP10.44□□□□□ -0.74
KTN1-214ENST00000554507 PPP6R1Q9UPN7 881 aa10.42□□□□□ -0.74
KTN1-214ENST00000554507 ADRA2BP18089 450 aa10.36□□□□□ -0.75
KTN1-214ENST00000554507 MAPK8IP2Q13387 824 aaPredicted RBP9.56□□□□□ -0.88
KTN1-214ENST00000554507 DMRT2Q9Y5R5 561 aa9.54□□□□□ -0.88
KTN1-214ENST00000554507 SCAF1Q9H7N4 1312 aaKnown RBP9.44□□□□□ -0.9
KTN1-214ENST00000554507 PPP4R3CPQ6ZMV5 832 aa9.2□□□□□ -0.94
KTN1-214ENST00000554507 HOXD11P31277 338 aaPredicted RBP9.14□□□□□ -0.95
KTN1-214ENST00000554507 CACNB1Q02641 598 aaPredicted RBP9.12□□□□□ -0.95
KTN1-214ENST00000554507 DCAF8L1A6NGE4 600 aa9.07□□□□□ -0.96
KTN1-214ENST00000554507 CNKSR2Q8WXI2 1034 aa9.06□□□□□ -0.96
KTN1-214ENST00000554507 RNF39Q9H2S5 420 aa9.01□□□□□ -0.97
KTN1-214ENST00000554507 RNF216Q9NWF9 866 aaPredicted RBP9.01□□□□□ -0.97
KTN1-214ENST00000554507 DNAJC5BQ9UF47 199 aa8.87□□□□□ -0.99
KTN1-214ENST00000554507 C1QBPQ07021 282 aaKnown RBP8.86□□□□□ -0.99
KTN1-214ENST00000554507 NCBP3Q53F19 620 aaKnown RBP8.77□□□□□ -1.01
KTN1-214ENST00000554507 POTEHQ6S545 545 aa8.74□□□□□ -1.01
KTN1-214ENST00000554507 NPM3O75607 178 aaKnown RBP8.68□□□□□ -1.02
KTN1-214ENST00000554507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.65□□□□□ -1.038e-7■■□□□ 12.1
KTN1-214ENST00000554507 U3KPZ7 1027 aaPredicted RBP8.5□□□□□ -1.05
KTN1-214ENST00000554507 SPINK5Q9NQ38 1064 aaPredicted RBP8.41□□□□□ -1.06
KTN1-214ENST00000554507 DSG3P32926 999 aa8.39□□□□□ -1.07
KTN1-214ENST00000554507 KCNA4P22459 653 aa8.38□□□□□ -1.07
KTN1-214ENST00000554507 CAPN15O75808 1086 aa8.36□□□□□ -1.07
KTN1-214ENST00000554507 SLC4A2P04920 1241 aa8.35□□□□□ -1.07
KTN1-214ENST00000554507 APLP2Q06481 763 aa8.2□□□□□ -1.1
KTN1-214ENST00000554507 TRHP20396 242 aaPredicted RBP8.19□□□□□ -1.1
KTN1-214ENST00000554507 ZNF219Q9P2Y4 722 aaPredicted RBP8.18□□□□□ -1.1
KTN1-214ENST00000554507 ABCB7O75027 752 aa8.17□□□□□ -1.1
KTN1-214ENST00000554507 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.16□□□□□ -1.1
KTN1-214ENST00000554507 HNRNPUL2Q1KMD3 747 aaKnown RBP8.16□□□□□ -1.1
KTN1-214ENST00000554507 SAMD1Q6SPF0 538 aaPredicted RBP8.12□□□□□ -1.11
KTN1-214ENST00000554507 MYCNP04198 464 aaPredicted RBP8.01□□□□□ -1.13
KTN1-214ENST00000554507 RBM42Q9BTD8 480 aaKnown RBP7.98□□□□□ -1.13
KTN1-214ENST00000554507 POLA2Q14181 598 aa7.96□□□□□ -1.14
KTN1-214ENST00000554507 CHRDL2Q6WN34 429 aa7.87□□□□□ -1.15
KTN1-214ENST00000554507 ATF5Q9Y2D1 282 aaPredicted RBP7.87□□□□□ -1.15
KTN1-214ENST00000554507 SLC4A1APQ9BWU0 796 aaKnown RBP7.87□□□□□ -1.15
KTN1-214ENST00000554507 PLSCR2Q9NRY7 297 aa7.87□□□□□ -1.15
KTN1-214ENST00000554507 FOXD4L1Q9NU39 408 aa7.86□□□□□ -1.15
KTN1-214ENST00000554507 AKT1S1Q96B36 256 aa7.79□□□□□ -1.16
KTN1-214ENST00000554507 ZBTB12Q9Y330 459 aaPredicted RBP7.78□□□□□ -1.16
KTN1-214ENST00000554507 ZBTB22O15209 634 aa7.73□□□□□ -1.17
KTN1-214ENST00000554507 REM2Q8IYK8 340 aaPredicted RBP7.72□□□□□ -1.17
KTN1-214ENST00000554507 OSCARQ8IYS5 282 aa7.71□□□□□ -1.17
KTN1-214ENST00000554507 PIP4P2Q8N4L2 257 aa7.67□□□□□ -1.18
KTN1-214ENST00000554507 ATXN8OSP0DMR3 200 aa7.65□□□□□ -1.18
KTN1-214ENST00000554507 SP7Q8TDD2 431 aaPredicted RBP7.65□□□□□ -1.18
KTN1-214ENST00000554507 PITPNM1O00562 1244 aa7.64□□□□□ -1.19
KTN1-214ENST00000554507 FXR2P51116 673 aaKnown RBP eCLIP7.62□□□□□ -1.194e-7■■■□□ 14.9
KTN1-214ENST00000554507 SPDYE2BA6NHP3 402 aa7.55□□□□□ -1.2
KTN1-214ENST00000554507 SPDYE6P0CI01 402 aa7.55□□□□□ -1.2
KTN1-214ENST00000554507 SPDYE2Q495Y8 402 aa7.55□□□□□ -1.2
KTN1-214ENST00000554507 HAX1O00165 279 aa7.52□□□□□ -1.21
KTN1-214ENST00000554507 FBLN2P98095 1184 aa7.51□□□□□ -1.21
KTN1-214ENST00000554507 MKRN4PQ13434 485 aaPredicted RBP7.51□□□□□ -1.21
KTN1-214ENST00000554507 EVX2Q03828 476 aa7.48□□□□□ -1.21
KTN1-214ENST00000554507 SSUH2Q9Y2M2 353 aa7.45□□□□□ -1.22
KTN1-214ENST00000554507 SPDYE1Q8NFV5 336 aaPredicted RBP7.43□□□□□ -1.22
KTN1-214ENST00000554507 PRKAR2AP13861 404 aaKnown RBP7.42□□□□□ -1.22
KTN1-214ENST00000554507 ZNF692Q9BU19 519 aaPredicted RBP7.41□□□□□ -1.22
KTN1-214ENST00000554507 CLEC11AQ9Y240 323 aa7.4□□□□□ -1.23
KTN1-214ENST00000554507 C19orf67A6NJJ6 358 aa7.38□□□□□ -1.23
KTN1-214ENST00000554507 CHADLQ6NUI6 762 aa7.31□□□□□ -1.24
KTN1-214ENST00000554507 PABPN1Q86U42 306 aaKnown RBP eCLIP7.31□□□□□ -1.24
KTN1-214ENST00000554507 GABBR2O75899 941 aa7.29□□□□□ -1.24
KTN1-214ENST00000554507 PRR29P0C7W0 189 aa7.27□□□□□ -1.25
KTN1-214ENST00000554507 CSRNP3Q8WYN3 585 aa7.23□□□□□ -1.25
KTN1-214ENST00000554507 FARP1Q9Y4F1 1045 aaPredicted RBP7.2□□□□□ -1.26
KTN1-214ENST00000554507 LHX8Q68G74 356 aa7.18□□□□□ -1.26
KTN1-214ENST00000554507 POTEIP0CG38 1075 aa7.16□□□□□ -1.26
KTN1-214ENST00000554507 CD44P16070 742 aaKnown RBP7.16□□□□□ -1.26
KTN1-214ENST00000554507 CLCN6P51797 869 aa7.12□□□□□ -1.27
KTN1-214ENST00000554507 CREBZFQ9NS37 354 aa7.1□□□□□ -1.27
KTN1-214ENST00000554507 ZNF579Q8NAF0 562 aaKnown RBP7.08□□□□□ -1.28
KTN1-214ENST00000554507 STAG3Q9UJ98 1225 aa7.07□□□□□ -1.28
KTN1-214ENST00000554507 ZRANB1Q9UGI0 708 aa7.04□□□□□ -1.28
KTN1-214ENST00000554507 SPDYE4A6NLX3 237 aa7.04□□□□□ -1.28
KTN1-214ENST00000554507 PCDH10Q9P2E7 1040 aa7.02□□□□□ -1.29
KTN1-214ENST00000554507 DCBLD2Q96PD2 775 aa7.01□□□□□ -1.29
KTN1-214ENST00000554507 EHMT2Q96KQ7 1210 aa7□□□□□ -1.29
KTN1-214ENST00000554507 GALR2O43603 387 aaPredicted RBP6.99□□□□□ -1.29
KTN1-214ENST00000554507 MNX1P50219 401 aaPredicted RBP6.98□□□□□ -1.29
KTN1-214ENST00000554507 PHF12Q96QT6 1004 aa6.95□□□□□ -1.3
KTN1-214ENST00000554507 PAK3O75914 559 aaPredicted RBP6.92□□□□□ -1.3
KTN1-214ENST00000554507 NPM1P06748 294 aaKnown RBP eCLIP6.92□□□□□ -1.3
KTN1-214ENST00000554507 POTEB2H3BUK9 544 aa6.92□□□□□ -1.3
KTN1-214ENST00000554507 PROM2Q8N271 834 aa6.91□□□□□ -1.3
KTN1-214ENST00000554507 OTUD5Q96G74 571 aa6.91□□□□□ -1.3
KTN1-214ENST00000554507 PELP1Q8IZL8 1130 aaKnown RBP6.89□□□□□ -1.31
KTN1-214ENST00000554507 MS4A3Q96HJ5 214 aa6.86□□□□□ -1.31
KTN1-214ENST00000554507 ASTLQ6HA08 431 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms