RNA–Protein interactions for RNA: ENST00000485155.1

MDH1-212, Transcript of malate dehydrogenase 1, humanhuman

TSL 1 (best)

Gene MDH1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-212ENST00000485155 AEBP2Q6ZN18 517 aaPredicted RBP22.89■■□□□ 1.25
MDH1-212ENST00000485155 CHIC1Q5VXU3 224 aa21.73■■□□□ 1.07
MDH1-212ENST00000485155 SENP3Q9H4L4 574 aaPredicted RBP19.54■□□□□ 0.72
MDH1-212ENST00000485155 PHF23Q9BUL5 403 aaPredicted RBP19.26■□□□□ 0.67
MDH1-212ENST00000485155 FOXD1Q16676 465 aa18.2■□□□□ 0.5
MDH1-212ENST00000485155 PLPPR3Q6T4P5 718 aa17.36■□□□□ 0.37
MDH1-212ENST00000485155 MSH5O43196 834 aa17.05■□□□□ 0.32
MDH1-212ENST00000485155 PIAS4Q8N2W9 510 aaPredicted RBP17.02■□□□□ 0.32
MDH1-212ENST00000485155 PPP6R1Q9UPN7 881 aa16.99■□□□□ 0.31
MDH1-212ENST00000485155 ADRA2BP18089 450 aa16.95■□□□□ 0.3
MDH1-212ENST00000485155 POTEDQ86YR6 584 aa16.65■□□□□ 0.26
MDH1-212ENST00000485155 MAPK8IP2Q13387 824 aaPredicted RBP15.57■□□□□ 0.08
MDH1-212ENST00000485155 SCAF1Q9H7N4 1312 aaKnown RBP15.52■□□□□ 0.08
MDH1-212ENST00000485155 DMRT2Q9Y5R5 561 aa15.49■□□□□ 0.07
MDH1-212ENST00000485155 PPP4R3CPQ6ZMV5 832 aa15.21■□□□□ 0.03
MDH1-212ENST00000485155 CNKSR2Q8WXI2 1034 aa14.93□□□□□ -0.02
MDH1-212ENST00000485155 HOXD11P31277 338 aaPredicted RBP14.91□□□□□ -0.02
MDH1-212ENST00000485155 DCAF8L1A6NGE4 600 aa14.86□□□□□ -0.03
MDH1-212ENST00000485155 RNF216Q9NWF9 866 aaPredicted RBP14.8□□□□□ -0.04
MDH1-212ENST00000485155 CACNB1Q02641 598 aaPredicted RBP14.63□□□□□ -0.07
MDH1-212ENST00000485155 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
MDH1-212ENST00000485155 RNF39Q9H2S5 420 aa14.54□□□□□ -0.08
MDH1-212ENST00000485155 NPM3O75607 178 aaKnown RBP14.41□□□□□ -0.1
MDH1-212ENST00000485155 DNAJC5BQ9UF47 199 aa14.39□□□□□ -0.11
MDH1-212ENST00000485155 C1QBPQ07021 282 aaKnown RBP14.32□□□□□ -0.12
MDH1-212ENST00000485155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.21□□□□□ -0.13
MDH1-212ENST00000485155 KCNA4P22459 653 aa14.12□□□□□ -0.15
MDH1-212ENST00000485155 U3KPZ7 1027 aaPredicted RBP13.92□□□□□ -0.18
MDH1-212ENST00000485155 SLC4A2P04920 1241 aa13.77□□□□□ -0.21
MDH1-212ENST00000485155 SPINK5Q9NQ38 1064 aaPredicted RBP13.71□□□□□ -0.21
MDH1-212ENST00000485155 CAPN15O75808 1086 aa13.7□□□□□ -0.22
MDH1-212ENST00000485155 DSG3P32926 999 aa13.61□□□□□ -0.23
MDH1-212ENST00000485155 APLP2Q06481 763 aa13.53□□□□□ -0.24
MDH1-212ENST00000485155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.51□□□□□ -0.25
MDH1-212ENST00000485155 HNRNPUL2Q1KMD3 747 aaKnown RBP13.51□□□□□ -0.25
MDH1-212ENST00000485155 TRHP20396 242 aaPredicted RBP13.47□□□□□ -0.25
MDH1-212ENST00000485155 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
MDH1-212ENST00000485155 SAMD1Q6SPF0 538 aaPredicted RBP13.44□□□□□ -0.26
MDH1-212ENST00000485155 ABCB7O75027 752 aa13.38□□□□□ -0.27
MDH1-212ENST00000485155 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
MDH1-212ENST00000485155 SLC4A1APQ9BWU0 796 aaKnown RBP13.34□□□□□ -0.27
MDH1-212ENST00000485155 FOXD4L1Q9NU39 408 aa13.2□□□□□ -0.3
MDH1-212ENST00000485155 POLA2Q14181 598 aa13.1□□□□□ -0.31
MDH1-212ENST00000485155 POTEHQ6S545 545 aa13.05□□□□□ -0.32
MDH1-212ENST00000485155 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
MDH1-212ENST00000485155 RBM42Q9BTD8 480 aaKnown RBP13□□□□□ -0.33
MDH1-212ENST00000485155 ZBTB22O15209 634 aa12.99□□□□□ -0.33
MDH1-212ENST00000485155 ZBTB12Q9Y330 459 aaPredicted RBP12.84□□□□□ -0.35
MDH1-212ENST00000485155 ATXN8OSP0DMR3 200 aa12.78□□□□□ -0.36
MDH1-212ENST00000485155 CHRDL2Q6WN34 429 aa12.71□□□□□ -0.37
MDH1-212ENST00000485155 OSCARQ8IYS5 282 aa12.7□□□□□ -0.38
MDH1-212ENST00000485155 AKT1S1Q96B36 256 aa12.69□□□□□ -0.38
MDH1-212ENST00000485155 REM2Q8IYK8 340 aaPredicted RBP12.57□□□□□ -0.4
MDH1-212ENST00000485155 FBLN2P98095 1184 aa12.52□□□□□ -0.41
MDH1-212ENST00000485155 SPDYE2BA6NHP3 402 aa12.44□□□□□ -0.42
MDH1-212ENST00000485155 PITPNM1O00562 1244 aa12.44□□□□□ -0.42
MDH1-212ENST00000485155 SPDYE6P0CI01 402 aa12.44□□□□□ -0.42
MDH1-212ENST00000485155 SPDYE2Q495Y8 402 aa12.44□□□□□ -0.42
MDH1-212ENST00000485155 MKRN4PQ13434 485 aaPredicted RBP12.43□□□□□ -0.42
MDH1-212ENST00000485155 PIP4P2Q8N4L2 257 aa12.4□□□□□ -0.42
MDH1-212ENST00000485155 CSRNP3Q8WYN3 585 aa12.37□□□□□ -0.43
MDH1-212ENST00000485155 FXR2P51116 673 aaKnown RBP eCLIP12.33□□□□□ -0.44
MDH1-212ENST00000485155 ZNF692Q9BU19 519 aaPredicted RBP12.29□□□□□ -0.44
MDH1-212ENST00000485155 SSUH2Q9Y2M2 353 aa12.28□□□□□ -0.44
MDH1-212ENST00000485155 SPDYE1Q8NFV5 336 aaPredicted RBP12.23□□□□□ -0.45
MDH1-212ENST00000485155 SP7Q8TDD2 431 aaPredicted RBP12.23□□□□□ -0.45
MDH1-212ENST00000485155 EHMT2Q96KQ7 1210 aa12.23□□□□□ -0.45
MDH1-212ENST00000485155 CLEC11AQ9Y240 323 aa12.21□□□□□ -0.45
MDH1-212ENST00000485155 HAX1O00165 279 aa12.18□□□□□ -0.46
MDH1-212ENST00000485155 PRKAR2AP13861 404 aaKnown RBP12.12□□□□□ -0.47
MDH1-212ENST00000485155 PABPN1Q86U42 306 aaKnown RBP eCLIP12.11□□□□□ -0.47
MDH1-212ENST00000485155 EVX2Q03828 476 aa12.02□□□□□ -0.49
MDH1-212ENST00000485155 PRR29P0C7W0 189 aa12□□□□□ -0.49
MDH1-212ENST00000485155 CHADLQ6NUI6 762 aa11.98□□□□□ -0.49
MDH1-212ENST00000485155 C19orf67A6NJJ6 358 aa11.94□□□□□ -0.5
MDH1-212ENST00000485155 SPDYE4A6NLX3 237 aa11.84□□□□□ -0.51
MDH1-212ENST00000485155 FARP1Q9Y4F1 1045 aaPredicted RBP11.8□□□□□ -0.52
MDH1-212ENST00000485155 STAG3Q9UJ98 1225 aa11.77□□□□□ -0.53
MDH1-212ENST00000485155 GABBR2O75899 941 aa11.76□□□□□ -0.53
MDH1-212ENST00000485155 CD44P16070 742 aaKnown RBP11.74□□□□□ -0.53
MDH1-212ENST00000485155 CREBZFQ9NS37 354 aa11.7□□□□□ -0.54
MDH1-212ENST00000485155 CLCN6P51797 869 aa11.57□□□□□ -0.56
MDH1-212ENST00000485155 ZRANB1Q9UGI0 708 aa11.57□□□□□ -0.56
MDH1-212ENST00000485155 ZNF579Q8NAF0 562 aaKnown RBP11.56□□□□□ -0.56
MDH1-212ENST00000485155 PROM2Q8N271 834 aa11.54□□□□□ -0.56
MDH1-212ENST00000485155 POTEIP0CG38 1075 aa11.51□□□□□ -0.57
MDH1-212ENST00000485155 NPM1P06748 294 aaKnown RBP eCLIP11.49□□□□□ -0.57
MDH1-212ENST00000485155 MNX1P50219 401 aaPredicted RBP11.49□□□□□ -0.57
MDH1-212ENST00000485155 PAK3O75914 559 aaPredicted RBP11.48□□□□□ -0.57
MDH1-212ENST00000485155 LHX8Q68G74 356 aa11.46□□□□□ -0.57
MDH1-212ENST00000485155 DCBLD2Q96PD2 775 aa11.45□□□□□ -0.58
MDH1-212ENST00000485155 GALR2O43603 387 aaPredicted RBP11.41□□□□□ -0.58
MDH1-212ENST00000485155 PHF12Q96QT6 1004 aa11.41□□□□□ -0.58
MDH1-212ENST00000485155 MIER1Q8N108 512 aa11.29□□□□□ -0.6
MDH1-212ENST00000485155 TSPYL2Q9H2G4 693 aaPredicted RBP11.29□□□□□ -0.6
MDH1-212ENST00000485155 PLEKHG5O94827 1062 aa11.28□□□□□ -0.6
MDH1-212ENST00000485155 MS4A3Q96HJ5 214 aa11.26□□□□□ -0.61
MDH1-212ENST00000485155 FKBP8Q14318 412 aa11.24□□□□□ -0.61
MDH1-212ENST00000485155 CCDC61Q9Y6R9 512 aa11.24□□□□□ -0.61
MDH1-212ENST00000485155 PLCD3Q8N3E9 789 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms