Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC011471.3-201ENST00000623576 402 ntBASIC11.66□□□□□ -0.54
COL8A2P25067 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
COL8A2P25067 AC023794.5-201ENST00000564380 2157 ntBASIC11.66□□□□□ -0.54
COL8A2P25067 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
COL8A2P25067 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
COL8A2P25067 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
COL8A2P25067 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
COL8A2P25067 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.66□□□□□ -0.54
COL8A2P25067 NRADDP-202ENST00000641269 1585 ntBASIC11.66□□□□□ -0.54
COL8A2P25067 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
COL8A2P25067 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
COL8A2P25067 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.66□□□□□ -0.54
COL8A2P25067 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
COL8A2P25067 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC11.66□□□□□ -0.54
COL8A2P25067 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
COL8A2P25067 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
COL8A2P25067 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
COL8A2P25067 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC11.65□□□□□ -0.54
COL8A2P25067 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
COL8A2P25067 MIR497HG-202ENST00000572453 3838 ntBASIC11.65□□□□□ -0.54
COL8A2P25067 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC11.65□□□□□ -0.54
COL8A2P25067 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
COL8A2P25067 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
COL8A2P25067 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
COL8A2P25067 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
COL8A2P25067 STX3-207ENST00000633708 3111 ntTSL 5 BASIC11.65□□□□□ -0.54
COL8A2P25067 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
COL8A2P25067 TK2-221ENST00000620035 5060 ntTSL 2 BASIC11.65□□□□□ -0.54
COL8A2P25067 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
COL8A2P25067 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC11.65□□□□□ -0.54
COL8A2P25067 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC11.65□□□□□ -0.54
COL8A2P25067 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
COL8A2P25067 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
COL8A2P25067 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
COL8A2P25067 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
COL8A2P25067 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
COL8A2P25067 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
COL8A2P25067 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
COL8A2P25067 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
COL8A2P25067 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
COL8A2P25067 AC073210.1-201ENST00000414799 232 ntBASIC11.65□□□□□ -0.54
COL8A2P25067 AL355334.1-201ENST00000417713 215 ntBASIC11.65□□□□□ -0.54
COL8A2P25067 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC11.65□□□□□ -0.54
COL8A2P25067 OR2A1-AS1-210ENST00000496968 531 ntBASIC11.65□□□□□ -0.54
COL8A2P25067 AC093909.3-201ENST00000504783 336 ntBASIC11.65□□□□□ -0.54
COL8A2P25067 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC11.65□□□□□ -0.54
COL8A2P25067 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
COL8A2P25067 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
COL8A2P25067 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC11.65□□□□□ -0.54
COL8A2P25067 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC11.65□□□□□ -0.54
COL8A2P25067 TRMT112P3-201ENST00000580149 358 ntBASIC11.65□□□□□ -0.54
COL8A2P25067 RN7SL556P-201ENST00000582856 298 ntBASIC11.65□□□□□ -0.54
COL8A2P25067 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC11.65□□□□□ -0.54
COL8A2P25067 GARS-210ENST00000627489 324 ntTSL 4 BASIC11.65□□□□□ -0.54
COL8A2P25067 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC11.65□□□□□ -0.54
COL8A2P25067 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC11.65□□□□□ -0.54
COL8A2P25067 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
COL8A2P25067 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
COL8A2P25067 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
COL8A2P25067 KRT8P24-201ENST00000560290 1559 ntBASIC11.65□□□□□ -0.54
COL8A2P25067 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
COL8A2P25067 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC11.65□□□□□ -0.54
COL8A2P25067 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
COL8A2P25067 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
COL8A2P25067 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
COL8A2P25067 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
COL8A2P25067 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
COL8A2P25067 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
COL8A2P25067 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.65□□□□□ -0.55
COL8A2P25067 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
COL8A2P25067 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.55
COL8A2P25067 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC11.65□□□□□ -0.55
COL8A2P25067 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
COL8A2P25067 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
COL8A2P25067 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
COL8A2P25067 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.65□□□□□ -0.55
COL8A2P25067 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
COL8A2P25067 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
COL8A2P25067 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.64□□□□□ -0.55
COL8A2P25067 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
COL8A2P25067 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
COL8A2P25067 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
COL8A2P25067 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
COL8A2P25067 STK3-218ENST00000617590 2485 ntTSL 5 BASIC11.64□□□□□ -0.55
COL8A2P25067 AL445209.1-201ENST00000607269 3491 ntBASIC11.64□□□□□ -0.55
COL8A2P25067 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
COL8A2P25067 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC11.64□□□□□ -0.55
COL8A2P25067 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
COL8A2P25067 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms