Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SERPINA13P-202ENST00000478994 924 ntBASIC12.31□□□□□ -0.44
APOC1P02654 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.31□□□□□ -0.44
APOC1P02654 AC119751.2-201ENST00000504529 210 ntBASIC12.31□□□□□ -0.44
APOC1P02654 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.31□□□□□ -0.44
APOC1P02654 AC126915.1-201ENST00000522847 1038 ntBASIC12.31□□□□□ -0.44
APOC1P02654 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.31□□□□□ -0.44
APOC1P02654 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOC1P02654 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.31□□□□□ -0.44
APOC1P02654 AC013355.1-201ENST00000562625 723 ntBASIC12.31□□□□□ -0.44
APOC1P02654 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.31□□□□□ -0.44
APOC1P02654 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.31□□□□□ -0.44
APOC1P02654 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.31□□□□□ -0.44
APOC1P02654 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
APOC1P02654 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC1P02654 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
APOC1P02654 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC1P02654 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOC1P02654 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOC1P02654 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
APOC1P02654 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC1P02654 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC1P02654 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOC1P02654 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.31□□□□□ -0.44
APOC1P02654 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
APOC1P02654 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.31□□□□□ -0.44
APOC1P02654 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC1P02654 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.31□□□□□ -0.44
APOC1P02654 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.31□□□□□ -0.44
APOC1P02654 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.31□□□□□ -0.44
APOC1P02654 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC1P02654 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC1P02654 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
APOC1P02654 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC1P02654 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
APOC1P02654 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC1P02654 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOC1P02654 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
APOC1P02654 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC1P02654 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC1P02654 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.3□□□□□ -0.44
APOC1P02654 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
APOC1P02654 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC1P02654 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC1P02654 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC1P02654 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
APOC1P02654 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC1P02654 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC1P02654 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
APOC1P02654 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
APOC1P02654 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC1P02654 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
APOC1P02654 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC1P02654 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
APOC1P02654 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
APOC1P02654 AC004554.1-201ENST00000422830 1468 ntBASIC12.3□□□□□ -0.44
APOC1P02654 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOC1P02654 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC1P02654 DPM3-202ENST00000368399 517 ntBASIC12.3□□□□□ -0.44
APOC1P02654 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC1P02654 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.3□□□□□ -0.44
APOC1P02654 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC1P02654 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC1P02654 MARK2P5-201ENST00000507649 634 ntBASIC12.3□□□□□ -0.44
APOC1P02654 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC1P02654 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC1P02654 AC093752.3-201ENST00000567343 901 ntBASIC12.3□□□□□ -0.44
APOC1P02654 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.3□□□□□ -0.44
APOC1P02654 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.3□□□□□ -0.44
APOC1P02654 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
APOC1P02654 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC1P02654 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
APOC1P02654 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
APOC1P02654 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC1P02654 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOC1P02654 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
APOC1P02654 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOC1P02654 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC1P02654 AC008620.2-201ENST00000510294 1569 ntBASIC12.3□□□□□ -0.44
APOC1P02654 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
APOC1P02654 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC12.3□□□□□ -0.44
APOC1P02654 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC1P02654 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC1P02654 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC1P02654 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.3□□□□□ -0.44
APOC1P02654 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
APOC1P02654 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC1P02654 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC1P02654 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOC1P02654 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
APOC1P02654 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.29□□□□□ -0.44
APOC1P02654 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.29□□□□□ -0.44
APOC1P02654 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
APOC1P02654 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.29□□□□□ -0.44
APOC1P02654 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms