Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
TRBV12-3P01733 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TRBV12-3P01733 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TRBV12-3P01733 DDC-214ENST00000622873 1839 ntTSL 3 BASIC10.68□□□□□ -0.7
TRBV12-3P01733 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
TRBV12-3P01733 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 AC106827.1-201ENST00000366454 431 ntBASIC10.67□□□□□ -0.7
TRBV12-3P01733 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 AC069218.1-201ENST00000435269 762 ntBASIC10.67□□□□□ -0.7
TRBV12-3P01733 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 RN7SL375P-201ENST00000492442 298 ntBASIC10.67□□□□□ -0.7
TRBV12-3P01733 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 RNA5SP417-201ENST00000516459 108 ntBASIC10.67□□□□□ -0.7
TRBV12-3P01733 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 AL132994.1-201ENST00000554098 400 ntBASIC10.67□□□□□ -0.7
TRBV12-3P01733 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 MIR3940-201ENST00000579148 102 ntBASIC10.67□□□□□ -0.7
TRBV12-3P01733 RPL17P45-201ENST00000586289 509 ntBASIC10.67□□□□□ -0.7
TRBV12-3P01733 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 AL359091.4-201ENST00000610052 409 ntBASIC10.67□□□□□ -0.7
TRBV12-3P01733 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC10.67□□□□□ -0.7
TRBV12-3P01733 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 AC009474.1-201ENST00000455096 1565 ntBASIC10.67□□□□□ -0.7
TRBV12-3P01733 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 AC019294.4-201ENST00000561777 2905 ntBASIC10.67□□□□□ -0.7
TRBV12-3P01733 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TRBV12-3P01733 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
TRBV12-3P01733 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TRBV12-3P01733 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
TRBV12-3P01733 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
TRBV12-3P01733 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TRBV12-3P01733 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TRBV12-3P01733 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TRBV12-3P01733 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
TRBV12-3P01733 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC10.66□□□□□ -0.7
TRBV12-3P01733 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
TRBV12-3P01733 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC10.66□□□□□ -0.7
TRBV12-3P01733 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
TRBV12-3P01733 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TRBV12-3P01733 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC10.66□□□□□ -0.7
TRBV12-3P01733 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms