Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.78□□□□□ -0.36
THBS1P07996 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
THBS1P07996 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
THBS1P07996 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
THBS1P07996 AC115284.2-201ENST00000624646 2054 ntBASIC12.77□□□□□ -0.36
THBS1P07996 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
THBS1P07996 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
THBS1P07996 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
THBS1P07996 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.77□□□□□ -0.36
THBS1P07996 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.77□□□□□ -0.36
THBS1P07996 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
THBS1P07996 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
THBS1P07996 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
THBS1P07996 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
THBS1P07996 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
THBS1P07996 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
THBS1P07996 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
THBS1P07996 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
THBS1P07996 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
THBS1P07996 PES1P2-201ENST00000449745 1735 ntBASIC12.77□□□□□ -0.36
THBS1P07996 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
THBS1P07996 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.77□□□□□ -0.36
THBS1P07996 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.77□□□□□ -0.36
THBS1P07996 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
THBS1P07996 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
THBS1P07996 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.77□□□□□ -0.37
THBS1P07996 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
THBS1P07996 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.77□□□□□ -0.37
THBS1P07996 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
THBS1P07996 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
THBS1P07996 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.77□□□□□ -0.37
THBS1P07996 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.77□□□□□ -0.37
THBS1P07996 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.77□□□□□ -0.37
THBS1P07996 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC12.77□□□□□ -0.37
THBS1P07996 KLF17P1-201ENST00000547105 1126 ntBASIC12.77□□□□□ -0.37
THBS1P07996 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC12.77□□□□□ -0.37
THBS1P07996 AC016629.1-201ENST00000596579 586 ntBASIC12.77□□□□□ -0.37
THBS1P07996 RETN-203ENST00000629642 400 ntTSL 5 BASIC12.77□□□□□ -0.37
THBS1P07996 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
THBS1P07996 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
THBS1P07996 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
THBS1P07996 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
THBS1P07996 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
THBS1P07996 KRT8P31-201ENST00000504812 1408 ntBASIC12.77□□□□□ -0.37
THBS1P07996 AC138761.6-201ENST00000583997 1423 ntBASIC12.77□□□□□ -0.37
THBS1P07996 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
THBS1P07996 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
THBS1P07996 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
THBS1P07996 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
THBS1P07996 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
THBS1P07996 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.77□□□□□ -0.37
THBS1P07996 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
THBS1P07996 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
THBS1P07996 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
THBS1P07996 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
THBS1P07996 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
THBS1P07996 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
THBS1P07996 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
THBS1P07996 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
THBS1P07996 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
THBS1P07996 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
THBS1P07996 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
THBS1P07996 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
THBS1P07996 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
THBS1P07996 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
THBS1P07996 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
THBS1P07996 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.76□□□□□ -0.37
THBS1P07996 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.76□□□□□ -0.37
THBS1P07996 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
THBS1P07996 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
THBS1P07996 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.76□□□□□ -0.37
THBS1P07996 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.76□□□□□ -0.37
THBS1P07996 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
THBS1P07996 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
THBS1P07996 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
THBS1P07996 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.76□□□□□ -0.37
THBS1P07996 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
THBS1P07996 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
THBS1P07996 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
THBS1P07996 AC106827.1-201ENST00000366454 431 ntBASIC12.76□□□□□ -0.37
THBS1P07996 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
THBS1P07996 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
THBS1P07996 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.76□□□□□ -0.37
THBS1P07996 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
THBS1P07996 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.76□□□□□ -0.37
THBS1P07996 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.76□□□□□ -0.37
THBS1P07996 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms