Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 TAF1C-203ENST00000541676 3502 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
NKX2-5P52952 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC11.67□□□□□ -0.54
NKX2-5P52952 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-5P52952 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC11.67□□□□□ -0.54
NKX2-5P52952 POM121L1P-202ENST00000605258 1835 ntBASIC11.67□□□□□ -0.54
NKX2-5P52952 PDIA6-204ENST00000404824 2236 ntTSL 2 BASIC11.67□□□□□ -0.54
NKX2-5P52952 LIFR-AS1-201ENST00000500733 3803 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NKX2-5P52952 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC11.67□□□□□ -0.54
NKX2-5P52952 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC11.67□□□□□ -0.54
NKX2-5P52952 CDH4-201ENST00000543233 3117 ntTSL 2 BASIC11.66□□□□□ -0.54
NKX2-5P52952 KXD1-217ENST00000602094 2738 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
NKX2-5P52952 FOSB-202ENST00000417353 3667 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 EXTL3-AS1-201ENST00000501224 3691 ntTSL 5 BASIC11.66□□□□□ -0.54
NKX2-5P52952 TPT1-AS1-205ENST00000517509 3456 ntTSL 2 BASIC11.66□□□□□ -0.54
NKX2-5P52952 HSPA8P7-201ENST00000443628 1948 ntBASIC11.66□□□□□ -0.54
NKX2-5P52952 SFI1-203ENST00000400288 4002 ntAPPRIS P4 TSL 2 BASIC11.66□□□□□ -0.54
NKX2-5P52952 DUSP27-203ENST00000443333 4034 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
NKX2-5P52952 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 ZMAT4-202ENST00000315769 2250 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 EME1-207ENST00000511648 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 USP1-201ENST00000339950 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 AL138725.1-201ENST00000407347 1314 ntBASIC11.66□□□□□ -0.54
NKX2-5P52952 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 CNOT3-202ENST00000358389 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC11.66□□□□□ -0.54
NKX2-5P52952 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 LMNA-206ENST00000368300 3190 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 LRTOMT-207ENST00000435085 3194 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
NKX2-5P52952 TMCC2-203ENST00000358024 3738 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 SEMA4A-203ENST00000368284 2981 ntTSL 2 BASIC11.66□□□□□ -0.54
NKX2-5P52952 HAUS5-201ENST00000203166 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC11.66□□□□□ -0.54
NKX2-5P52952 CRP-201ENST00000255030 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
NKX2-5P52952 TM9SF4-201ENST00000217315 4032 ntTSL 2 BASIC11.66□□□□□ -0.54
NKX2-5P52952 CYB5R3-202ENST00000361740 2938 ntTSL 2 BASIC11.66□□□□□ -0.54
NKX2-5P52952 AL136295.4-201ENST00000561419 4351 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
NKX2-5P52952 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC11.66□□□□□ -0.54
NKX2-5P52952 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.66□□□□□ -0.54
NKX2-5P52952 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC11.66□□□□□ -0.54
NKX2-5P52952 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.66□□□□□ -0.54
NKX2-5P52952 COPS8-203ENST00000409334 794 ntTSL 5 BASIC11.66□□□□□ -0.54
NKX2-5P52952 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC11.66□□□□□ -0.54
NKX2-5P52952 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC11.66□□□□□ -0.54
NKX2-5P52952 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC11.66□□□□□ -0.54
NKX2-5P52952 AC099522.2-201ENST00000607001 744 ntBASIC11.66□□□□□ -0.54
NKX2-5P52952 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
NKX2-5P52952 AC139530.3-201ENST00000620344 690 ntBASIC11.66□□□□□ -0.54
NKX2-5P52952 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.66□□□□□ -0.54
NKX2-5P52952 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 MYOZ3-201ENST00000297130 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 PKN2-203ENST00000370521 6121 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 PLEKHH1-201ENST00000329153 6604 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
NKX2-5P52952 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 FAM131A-201ENST00000310585 3677 ntTSL 2 BASIC11.66□□□□□ -0.54
NKX2-5P52952 ATG7-202ENST00000354956 2296 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 TTC8-205ENST00000358622 2297 ntTSL 5 BASIC11.66□□□□□ -0.54
NKX2-5P52952 PRICKLE1-209ENST00000552240 3311 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
NKX2-5P52952 MAP3K9-204ENST00000554146 2982 ntTSL 2 BASIC11.66□□□□□ -0.54
NKX2-5P52952 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC11.66□□□□□ -0.54
NKX2-5P52952 FP700125.1-201ENST00000628622 3262 ntTSL 2 BASIC11.66□□□□□ -0.54
NKX2-5P52952 CMTR2-202ENST00000434935 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 PCDHGA7-201ENST00000518325 4605 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-5P52952 FAM160A1-201ENST00000435205 4576 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
NKX2-5P52952 RNF6-203ENST00000381588 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 USP39-220ENST00000613444 2161 ntTSL 2 BASIC11.65□□□□□ -0.54
NKX2-5P52952 MAN2C1-224ENST00000565683 3300 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 GFM1-201ENST00000264263 3453 ntTSL 5 BASIC11.65□□□□□ -0.54
NKX2-5P52952 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
NKX2-5P52952 AC138028.6-201ENST00000616106 1482 ntBASIC11.65□□□□□ -0.54
NKX2-5P52952 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
NKX2-5P52952 RECQL5-201ENST00000317905 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 SUGP1-201ENST00000247001 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 FXR1-220ENST00000491062 1768 ntTSL 2 BASIC11.65□□□□□ -0.54
NKX2-5P52952 ATG5-204ENST00000369076 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 NCL-201ENST00000322723 4034 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
NKX2-5P52952 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 PYGL-205ENST00000532462 2711 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 TTLL2-201ENST00000239587 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
NKX2-5P52952 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
NKX2-5P52952 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
NKX2-5P52952 HMGN1P19-201ENST00000436976 333 ntBASIC11.65□□□□□ -0.54
NKX2-5P52952 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms