RNA–Protein interactions for RNA: ENST00000264263.9

GFM1-201, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5 BASIC

Gene GFM1, Length 3,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-201ENST00000264263 NISCHQ9Y2I1 1504 aa21.58■■□□□ 1.04
GFM1-201ENST00000264263 SHROOM4Q9ULL8 1493 aa20■□□□□ 0.79
GFM1-201ENST00000264263 SUPT5HO00267 1087 aaKnown RBP19.9■□□□□ 0.78
GFM1-201ENST00000264263 DCAF8L2P0C7V8 631 aa19.43■□□□□ 0.7
GFM1-201ENST00000264263 PCGF6Q9BYE7 350 aa19.33■□□□□ 0.68
GFM1-201ENST00000264263 PPARGC1BQ86YN6 1023 aaKnown RBP19.21■□□□□ 0.67
GFM1-201ENST00000264263 HRCP23327 699 aa19.12■□□□□ 0.65
GFM1-201ENST00000264263 CHIC1Q5VXU3 224 aa18.95■□□□□ 0.62
GFM1-201ENST00000264263 LOC105371045A0A1W2PR82 267 aa18.88■□□□□ 0.61
GFM1-201ENST00000264263 EHMT2Q96KQ7 1210 aa18.86■□□□□ 0.61
GFM1-201ENST00000264263 MYO15BQ96JP2 1530 aa18.83■□□□□ 0.6
GFM1-201ENST00000264263 FAM9AQ8IZU1 332 aaPredicted RBP18.58■□□□□ 0.57
GFM1-201ENST00000264263 TRIM26Q12899 539 aaPredicted RBP18.36■□□□□ 0.53
GFM1-201ENST00000264263 PELP1Q8IZL8 1130 aaKnown RBP18.35■□□□□ 0.53
GFM1-201ENST00000264263 TTBK1Q5TCY1 1321 aaPredicted RBP18.27■□□□□ 0.52
GFM1-201ENST00000264263 SCAF1Q9H7N4 1312 aaKnown RBP18.2■□□□□ 0.5
GFM1-201ENST00000264263 ZCCHC6Q5VYS8 1495 aaKnown RBP18.2■□□□□ 0.5
GFM1-201ENST00000264263 TRIM41Q8WV44 630 aa18.17■□□□□ 0.5
GFM1-201ENST00000264263 DCAF1Q9Y4B6 1507 aa18.03■□□□□ 0.48
GFM1-201ENST00000264263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.01■□□□□ 0.47
GFM1-201ENST00000264263 ZEB1P37275 1124 aaPredicted RBP17.99■□□□□ 0.47
GFM1-201ENST00000264263 CCER1Q8TC90 406 aaPredicted RBP17.95■□□□□ 0.46
GFM1-201ENST00000264263 YTHDC1Q96MU7 727 aaKnown RBP17.83■□□□□ 0.44
GFM1-201ENST00000264263 GTF3C3Q9Y5Q9 886 aa17.82■□□□□ 0.44
GFM1-201ENST00000264263 NEUROD1Q13562 356 aa17.78■□□□□ 0.44
GFM1-201ENST00000264263 ACIN1Q9UKV3 1341 aaKnown RBP17.7■□□□□ 0.42
GFM1-201ENST00000264263 DIEXFQ68CQ4 756 aaKnown RBP17.67■□□□□ 0.42
GFM1-201ENST00000264263 CENPBP07199 599 aaPredicted RBP17.66■□□□□ 0.42
GFM1-201ENST00000264263 CCDC180Q9P1Z9 1646 aa17.66■□□□□ 0.42
GFM1-201ENST00000264263 RANGAP1P46060 587 aaPredicted RBP17.57■□□□□ 0.4
GFM1-201ENST00000264263 MYT1Q01538 1121 aa17.56■□□□□ 0.4
GFM1-201ENST00000264263 RSF1Q96T23 1441 aaPredicted RBP17.48■□□□□ 0.39
GFM1-201ENST00000264263 UBTFP17480 764 aaKnown RBP17.45■□□□□ 0.38
GFM1-201ENST00000264263 HNRNPUL2Q1KMD3 747 aaKnown RBP17.44■□□□□ 0.38
GFM1-201ENST00000264263 SCRIBQ14160 1630 aa17.44■□□□□ 0.38
GFM1-201ENST00000264263 RB1CC1Q8TDY2 1594 aa17.35■□□□□ 0.37
GFM1-201ENST00000264263 MIER1Q8N108 512 aa17.26■□□□□ 0.35
GFM1-201ENST00000264263 ZNF316A6NFI3 1004 aaPredicted RBP17.25■□□□□ 0.35
GFM1-201ENST00000264263 CECR2Q9BXF3 1484 aa17.22■□□□□ 0.35
GFM1-201ENST00000264263 ABCC9O60706 1549 aa17.19■□□□□ 0.34
GFM1-201ENST00000264263 APLP2Q06481 763 aa17.12■□□□□ 0.33
GFM1-201ENST00000264263 ITGAEP38570 1179 aa17.03■□□□□ 0.32
GFM1-201ENST00000264263 MROH2BQ7Z745 1585 aa17.02■□□□□ 0.32
GFM1-201ENST00000264263 CSRNP3Q8WYN3 585 aa17.01■□□□□ 0.31
GFM1-201ENST00000264263 CEP162Q5TB80 1403 aa17■□□□□ 0.31
GFM1-201ENST00000264263 BCANQ96GW7 911 aa17■□□□□ 0.31
GFM1-201ENST00000264263 SOGA1O94964 1423 aa16.98■□□□□ 0.31
GFM1-201ENST00000264263 ABCC8Q09428 1581 aa16.96■□□□□ 0.31
GFM1-201ENST00000264263 CCDC88BA6NC98 1476 aa16.95■□□□□ 0.3
GFM1-201ENST00000264263 WIZO95785 1651 aa16.92■□□□□ 0.3
GFM1-201ENST00000264263 PABPN1Q86U42 306 aaKnown RBP eCLIP16.91■□□□□ 0.3
GFM1-201ENST00000264263 RUSC2Q8N2Y8 1516 aa16.87■□□□□ 0.29
GFM1-201ENST00000264263 BCL11AQ9H165 835 aa16.82■□□□□ 0.28
GFM1-201ENST00000264263 SUPT16HQ9Y5B9 1047 aaKnown RBP16.76■□□□□ 0.27
GFM1-201ENST00000264263 TNIKQ9UKE5 1360 aa16.75■□□□□ 0.27
GFM1-201ENST00000264263 KCNH8Q96L42 1107 aa16.75■□□□□ 0.27
GFM1-201ENST00000264263 HIRIP3Q9BW71 556 aaPredicted RBP16.72■□□□□ 0.27
GFM1-201ENST00000264263 ATP1B4Q9UN42 357 aaPredicted RBP16.72■□□□□ 0.27
GFM1-201ENST00000264263 ANP32EQ9BTT0 268 aa16.71■□□□□ 0.26
GFM1-201ENST00000264263 CLIP1P30622 1438 aa16.65■□□□□ 0.26
GFM1-201ENST00000264263 WRNQ14191 1432 aaPredicted RBP eCLIP16.64■□□□□ 0.25
GFM1-201ENST00000264263 TSHZ2Q9NRE2 1034 aa16.64■□□□□ 0.25
GFM1-201ENST00000264263 FKBP8Q14318 412 aa16.63■□□□□ 0.25
GFM1-201ENST00000264263 DDX10Q13206 875 aaKnown RBP16.61■□□□□ 0.25
GFM1-201ENST00000264263 TRIM52Q96A61 297 aa16.59■□□□□ 0.25
GFM1-201ENST00000264263 GOLGA3Q08378 1498 aa16.59■□□□□ 0.25
GFM1-201ENST00000264263 KANK4Q5T7N3 995 aaPredicted RBP16.58■□□□□ 0.25
GFM1-201ENST00000264263 ERICH6Q7L0X2 663 aa16.55■□□□□ 0.24
GFM1-201ENST00000264263 NEFLP07196 543 aa16.52■□□□□ 0.23
GFM1-201ENST00000264263 FAM50AQ14320 339 aaKnown RBP16.5■□□□□ 0.23
GFM1-201ENST00000264263 BAZ1AQ9NRL2 1556 aaPredicted RBP16.49■□□□□ 0.23
GFM1-201ENST00000264263 IRX6P78412 446 aaPredicted RBP16.48■□□□□ 0.23
GFM1-201ENST00000264263 CNGB1Q14028 1251 aaPredicted RBP16.48■□□□□ 0.23
GFM1-201ENST00000264263 P3H3Q8IVL6 736 aa16.48■□□□□ 0.23
GFM1-201ENST00000264263 SIN3AQ96ST3 1273 aa16.47■□□□□ 0.23
GFM1-201ENST00000264263 NACADO15069 1562 aa16.43■□□□□ 0.22
GFM1-201ENST00000264263 RAPGEF2Q9Y4G8 1499 aa16.43■□□□□ 0.22
GFM1-201ENST00000264263 DHX57Q6P158 1386 aaKnown RBP16.43■□□□□ 0.22
GFM1-201ENST00000264263 VPS8Q8N3P4 1428 aa16.42■□□□□ 0.22
GFM1-201ENST00000264263 EEA1Q15075 1411 aa16.41■□□□□ 0.22
GFM1-201ENST00000264263 CEP164Q9UPV0 1460 aa16.4■□□□□ 0.22
GFM1-201ENST00000264263 TOP2AP11388 1531 aaKnown RBP16.38■□□□□ 0.21
GFM1-201ENST00000264263 SMARCA2P51531 1590 aa16.38■□□□□ 0.21
GFM1-201ENST00000264263 RBM19Q9Y4C8 960 aaKnown RBP16.34■□□□□ 0.21
GFM1-201ENST00000264263 SENP3-EIF4A1A0A087X0R7 540 aa16.3■□□□□ 0.2
GFM1-201ENST00000264263 EIF4G1Q04637 1599 aaKnown RBP16.3■□□□□ 0.2
GFM1-201ENST00000264263 ANP32CO43423 234 aa16.29■□□□□ 0.2
GFM1-201ENST00000264263 SMARCA4P51532 1647 aa16.27■□□□□ 0.19
GFM1-201ENST00000264263 CLSPNQ9HAW4 1339 aa16.25■□□□□ 0.19
GFM1-201ENST00000264263 HNRNPUQ00839 825 aaKnown RBP eCLIP16.24■□□□□ 0.19
GFM1-201ENST00000264263 SYNJ1O43426 1573 aa16.22■□□□□ 0.19
GFM1-201ENST00000264263 RAB3GAP2Q9H2M9 1393 aa16.21■□□□□ 0.19
GFM1-201ENST00000264263 KIF21BO75037 1637 aa16.21■□□□□ 0.19
GFM1-201ENST00000264263 CCNB3Q8WWL7 1395 aa16.2■□□□□ 0.18
GFM1-201ENST00000264263 NBR1Q14596 966 aa16.19■□□□□ 0.18
GFM1-201ENST00000264263 POLR3GLQ9BT43 218 aa16.18■□□□□ 0.18
GFM1-201ENST00000264263 CDK11AQ9UQ88 783 aaPredicted RBP16.13■□□□□ 0.17
GFM1-201ENST00000264263 ARID3CA6NKF2 412 aa16.12■□□□□ 0.17
GFM1-201ENST00000264263 FAM9BQ8IZU0 186 aa16.11■□□□□ 0.17
GFM1-201ENST00000264263 ARAP1Q96P48 1450 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms