Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SNRPFP62306 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.94□□□□□ -0.02
SNRPFP62306 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 CICP9-201ENST00000444451 1913 ntBASIC14.94□□□□□ -0.02
SNRPFP62306 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
SNRPFP62306 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SNRPFP62306 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SNRPFP62306 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC14.94□□□□□ -0.02
SNRPFP62306 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC14.94□□□□□ -0.02
SNRPFP62306 DPY19L2P5-201ENST00000456300 331 ntBASIC14.94□□□□□ -0.02
SNRPFP62306 EEF1GP8-201ENST00000506566 1154 ntBASIC14.94□□□□□ -0.02
SNRPFP62306 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 CD44-224ENST00000526669 870 ntTSL 5 BASIC14.94□□□□□ -0.02
SNRPFP62306 AP002803.1-201ENST00000528836 498 ntBASIC14.94□□□□□ -0.02
SNRPFP62306 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.94□□□□□ -0.02
SNRPFP62306 RN7SL357P-201ENST00000581065 298 ntBASIC14.94□□□□□ -0.02
SNRPFP62306 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC14.94□□□□□ -0.02
SNRPFP62306 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
SNRPFP62306 AC007881.3-201ENST00000608897 607 ntBASIC14.94□□□□□ -0.02
SNRPFP62306 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.94□□□□□ -0.02
SNRPFP62306 Z82244.1-201ENST00000631502 840 ntBASIC14.94□□□□□ -0.02
SNRPFP62306 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC14.94□□□□□ -0.02
SNRPFP62306 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SNRPFP62306 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.94□□□□□ -0.02
SNRPFP62306 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
SNRPFP62306 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SNRPFP62306 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SNRPFP62306 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC14.94□□□□□ -0.02
SNRPFP62306 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SNRPFP62306 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SNRPFP62306 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
SNRPFP62306 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC14.93□□□□□ -0.02
SNRPFP62306 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNRPFP62306 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNRPFP62306 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNRPFP62306 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNRPFP62306 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNRPFP62306 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.93□□□□□ -0.02
SNRPFP62306 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC14.93□□□□□ -0.02
SNRPFP62306 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC14.93□□□□□ -0.02
SNRPFP62306 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNRPFP62306 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SNRPFP62306 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNRPFP62306 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNRPFP62306 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SNRPFP62306 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
SNRPFP62306 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNRPFP62306 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNRPFP62306 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNRPFP62306 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNRPFP62306 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNRPFP62306 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SNRPFP62306 HIST2H2BA-201ENST00000412169 381 ntBASIC14.93□□□□□ -0.02
SNRPFP62306 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.93□□□□□ -0.02
SNRPFP62306 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC14.93□□□□□ -0.02
SNRPFP62306 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
SNRPFP62306 RNA5SP406-201ENST00000516106 112 ntBASIC14.93□□□□□ -0.02
SNRPFP62306 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
SNRPFP62306 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SNRPFP62306 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SNRPFP62306 RHOQP1-201ENST00000555758 579 ntBASIC14.93□□□□□ -0.02
SNRPFP62306 DNM1P30-201ENST00000563586 452 ntBASIC14.93□□□□□ -0.02
SNRPFP62306 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNRPFP62306 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.93□□□□□ -0.02
SNRPFP62306 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.93□□□□□ -0.02
SNRPFP62306 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.93□□□□□ -0.02
SNRPFP62306 AL591926.3-201ENST00000611630 238 ntBASIC14.93□□□□□ -0.02
SNRPFP62306 AC026120.2-201ENST00000617239 309 ntBASIC14.93□□□□□ -0.02
SNRPFP62306 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
SNRPFP62306 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.93□□□□□ -0.02
SNRPFP62306 AL805961.1-201ENST00000642026 753 ntBASIC14.93□□□□□ -0.02
SNRPFP62306 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNRPFP62306 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNRPFP62306 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNRPFP62306 KRT8P42-201ENST00000405771 1399 ntBASIC14.93□□□□□ -0.02
SNRPFP62306 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC14.93□□□□□ -0.02
SNRPFP62306 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNRPFP62306 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.93□□□□□ -0.02
SNRPFP62306 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SNRPFP62306 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms