Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
CD28P10747 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CD28P10747 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC10.86□□□□□ -0.67
CD28P10747 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC10.86□□□□□ -0.67
CD28P10747 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC10.86□□□□□ -0.67
CD28P10747 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC10.86□□□□□ -0.67
CD28P10747 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
CD28P10747 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC10.86□□□□□ -0.67
CD28P10747 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
CD28P10747 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CD28P10747 GOLGA8UP-201ENST00000527159 1755 ntBASIC10.86□□□□□ -0.67
CD28P10747 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC10.86□□□□□ -0.67
CD28P10747 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
CD28P10747 AP000354.1-201ENST00000396982 456 ntBASIC10.86□□□□□ -0.67
CD28P10747 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC10.86□□□□□ -0.67
CD28P10747 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC10.86□□□□□ -0.67
CD28P10747 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC10.86□□□□□ -0.67
CD28P10747 AC006529.1-201ENST00000459978 637 ntBASIC10.86□□□□□ -0.67
CD28P10747 RN7SL494P-201ENST00000461517 304 ntBASIC10.86□□□□□ -0.67
CD28P10747 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC10.86□□□□□ -0.67
CD28P10747 AC010234.1-201ENST00000494599 870 ntBASIC10.86□□□□□ -0.67
CD28P10747 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC10.86□□□□□ -0.67
CD28P10747 AC093300.1-201ENST00000510368 1201 ntBASIC10.86□□□□□ -0.67
CD28P10747 RPS23-207ENST00000511844 530 ntTSL 2 BASIC10.86□□□□□ -0.67
CD28P10747 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC10.86□□□□□ -0.67
CD28P10747 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 GOLGA2P7-209ENST00000560408 745 ntBASIC10.86□□□□□ -0.67
CD28P10747 AC013553.1-201ENST00000560906 267 ntBASIC10.86□□□□□ -0.67
CD28P10747 NAMA-206ENST00000605377 509 ntTSL 5 BASIC10.86□□□□□ -0.67
CD28P10747 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC10.86□□□□□ -0.67
CD28P10747 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CD28P10747 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CD28P10747 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC10.86□□□□□ -0.67
CD28P10747 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
CD28P10747 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC10.86□□□□□ -0.67
CD28P10747 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC10.86□□□□□ -0.67
CD28P10747 AL365181.1-201ENST00000564032 1828 ntBASIC10.86□□□□□ -0.67
CD28P10747 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
CD28P10747 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
CD28P10747 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
CD28P10747 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CD28P10747 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CD28P10747 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CD28P10747 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC10.85□□□□□ -0.67
CD28P10747 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CD28P10747 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CD28P10747 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC10.85□□□□□ -0.67
CD28P10747 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CD28P10747 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC10.85□□□□□ -0.67
CD28P10747 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CD28P10747 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
CD28P10747 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CD28P10747 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC10.85□□□□□ -0.67
CD28P10747 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.67
CD28P10747 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC10.85□□□□□ -0.67
CD28P10747 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CD28P10747 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CD28P10747 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
CD28P10747 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CD28P10747 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CD28P10747 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CD28P10747 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC10.85□□□□□ -0.67
CD28P10747 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC10.85□□□□□ -0.67
CD28P10747 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CD28P10747 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CD28P10747 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CD28P10747 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CD28P10747 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CD28P10747 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
CD28P10747 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CD28P10747 NHP2-202ENST00000314397 599 ntTSL 2 BASIC10.85□□□□□ -0.67
CD28P10747 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms