Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
O00370 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
O00370 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
O00370 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.78□□□□□ -0.04
O00370 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.78□□□□□ -0.04
O00370 PES1P2-201ENST00000449745 1735 ntBASIC14.78□□□□□ -0.04
O00370 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
O00370 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.77□□□□□ -0.04
O00370 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
O00370 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
O00370 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
O00370 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
O00370 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
O00370 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
O00370 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.77□□□□□ -0.04
O00370 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
O00370 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
O00370 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
O00370 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
O00370 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
O00370 AP002761.4-201ENST00000565433 3361 ntBASIC14.77□□□□□ -0.04
O00370 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
O00370 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
O00370 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
O00370 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
O00370 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
O00370 PYY2-201ENST00000315776 282 ntBASIC14.77□□□□□ -0.05
O00370 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.77□□□□□ -0.05
O00370 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
O00370 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
O00370 AL391647.1-201ENST00000395664 511 ntBASIC14.77□□□□□ -0.05
O00370 RPL3P2-204ENST00000413027 1203 ntBASIC14.77□□□□□ -0.05
O00370 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.77□□□□□ -0.05
O00370 AC092573.1-201ENST00000433054 884 ntBASIC14.77□□□□□ -0.05
O00370 EEF1DP2-201ENST00000433698 843 ntBASIC14.77□□□□□ -0.05
O00370 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.77□□□□□ -0.05
O00370 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.77□□□□□ -0.05
O00370 ORAOV1P1-201ENST00000503108 395 ntBASIC14.77□□□□□ -0.05
O00370 COQ10BP2-201ENST00000513804 724 ntBASIC14.77□□□□□ -0.05
O00370 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.77□□□□□ -0.05
O00370 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.77□□□□□ -0.05
O00370 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14.77□□□□□ -0.05
O00370 AC005632.3-201ENST00000605544 308 ntBASIC14.77□□□□□ -0.05
O00370 AC106872.11-201ENST00000605838 421 ntBASIC14.77□□□□□ -0.05
O00370 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
O00370 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.77□□□□□ -0.05
O00370 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
O00370 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
O00370 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
O00370 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
O00370 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
O00370 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
O00370 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
O00370 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
O00370 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
O00370 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.77□□□□□ -0.05
O00370 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
O00370 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
O00370 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
O00370 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.77□□□□□ -0.05
O00370 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
O00370 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
O00370 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
O00370 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
O00370 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.77□□□□□ -0.05
O00370 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
O00370 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
O00370 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
O00370 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
O00370 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
O00370 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.76□□□□□ -0.05
O00370 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
O00370 AC019109.1-201ENST00000401725 1874 ntBASIC14.76□□□□□ -0.05
O00370 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.76□□□□□ -0.05
O00370 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
O00370 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
O00370 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.76□□□□□ -0.05
O00370 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
O00370 Z98885.3-201ENST00000624882 1757 ntBASIC14.76□□□□□ -0.05
O00370 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
O00370 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.76□□□□□ -0.05
O00370 AC108024.1-201ENST00000626286 1721 ntBASIC14.76□□□□□ -0.05
O00370 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
O00370 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
O00370 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
O00370 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.76□□□□□ -0.05
O00370 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
O00370 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
O00370 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
O00370 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.76□□□□□ -0.05
O00370 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
O00370 AL627422.1-201ENST00000434104 580 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms