Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 AC106818.1-201ENST00000623223 3242 ntBASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 AP006547.1-201ENST00000563435 692 ntBASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 AL356740.1-201ENST00000602192 1297 ntBASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
FOXJ3Q9UPW0 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 PCDHB17P-202ENST00000623466 3066 ntBASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 AC008040.5-201ENST00000599781 1781 ntBASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 AC026954.1-201ENST00000429771 1293 ntBASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 XBP1P1-201ENST00000436573 652 ntBASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 CHCHD2P2-201ENST00000503744 321 ntBASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 AP000812.2-201ENST00000538934 718 ntBASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 AC010328.2-201ENST00000597698 1111 ntBASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 AC009542.2-202ENST00000619004 1067 ntBASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 AL162426.1-201ENST00000624141 743 ntBASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
FOXJ3Q9UPW0 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms