Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 CYP4F23P-201ENST00000593402 1579 ntBASIC12.7□□□□□ -0.38
USB1Q9BQ65 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 DSTNP1-201ENST00000419906 465 ntBASIC12.7□□□□□ -0.38
USB1Q9BQ65 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 ISCA2P1-201ENST00000425548 448 ntBASIC12.7□□□□□ -0.38
USB1Q9BQ65 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 AC026979.4-201ENST00000606555 645 ntBASIC12.7□□□□□ -0.38
USB1Q9BQ65 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 AC027020.2-201ENST00000602585 2389 ntBASIC12.7□□□□□ -0.38
USB1Q9BQ65 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 FRMPD2B-201ENST00000431305 1347 ntBASIC12.69□□□□□ -0.38
USB1Q9BQ65 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.69□□□□□ -0.38
USB1Q9BQ65 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 AC092506.1-202ENST00000401022 528 ntBASIC12.69□□□□□ -0.38
USB1Q9BQ65 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 RN7SKP253-201ENST00000516424 309 ntBASIC12.69□□□□□ -0.38
USB1Q9BQ65 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 AC131934.1-201ENST00000527799 912 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms