Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ATP6V0A1Q93050 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ATP6V0A1Q93050 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.46■□□□□ 0.06
ATP6V0A1Q93050 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.46■□□□□ 0.06
ATP6V0A1Q93050 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
ATP6V0A1Q93050 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ATP6V0A1Q93050 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 SNORA50C-201ENST00000408535 133 ntBASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 OR51A9P-201ENST00000422578 911 ntBASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 KRT18P46-201ENST00000435568 1279 ntBASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 THY1-209ENST00000580275 578 ntTSL 3 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 SNORA50.1-201ENST00000628590 135 ntBASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 AC131212.3-201ENST00000624087 4219 ntBASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 AC023794.5-201ENST00000564380 2157 ntBASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
ATP6V0A1Q93050 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 Z98885.3-201ENST00000624882 1757 ntBASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 AC089987.1-201ENST00000551654 2209 ntBASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 GRK6P1-201ENST00000400595 1711 ntBASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 ALG1L3P-201ENST00000503331 765 ntBASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 DNM1P51-201ENST00000558149 522 ntBASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 ETV2-207ENST00000619399 994 ntTSL 5 BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATP6V0A1Q93050 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms