Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BBS1Q8NFJ9 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.51□□□□□ -0.41
BBS1Q8NFJ9 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BBS1Q8NFJ9 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BBS1Q8NFJ9 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BBS1Q8NFJ9 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.51□□□□□ -0.41
BBS1Q8NFJ9 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BBS1Q8NFJ9 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
BBS1Q8NFJ9 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BBS1Q8NFJ9 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.51□□□□□ -0.41
BBS1Q8NFJ9 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BBS1Q8NFJ9 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.51□□□□□ -0.41
BBS1Q8NFJ9 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.51□□□□□ -0.41
BBS1Q8NFJ9 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BBS1Q8NFJ9 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
BBS1Q8NFJ9 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BBS1Q8NFJ9 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BBS1Q8NFJ9 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BBS1Q8NFJ9 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BBS1Q8NFJ9 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BBS1Q8NFJ9 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 AC011742.3-201ENST00000439053 820 ntBASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 CHCHD2P2-201ENST00000503744 321 ntBASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 AC079316.1-201ENST00000548397 411 ntBASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 RN7SL455P-201ENST00000580629 282 ntBASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 EEF1DP1-201ENST00000585891 896 ntBASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 AL139424.3-202ENST00000641619 917 ntBASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 CICP9-201ENST00000444451 1913 ntBASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 MICA-210ENST00000616296 2260 ntTSL 5 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
BBS1Q8NFJ9 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BBS1Q8NFJ9 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BBS1Q8NFJ9 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BBS1Q8NFJ9 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.49□□□□□ -0.41
BBS1Q8NFJ9 PCDHB17P-202ENST00000623466 3066 ntBASIC12.49□□□□□ -0.41
BBS1Q8NFJ9 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.49□□□□□ -0.41
BBS1Q8NFJ9 AC015819.3-201ENST00000624305 2674 ntBASIC12.49□□□□□ -0.41
BBS1Q8NFJ9 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.49□□□□□ -0.41
BBS1Q8NFJ9 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.49□□□□□ -0.41
BBS1Q8NFJ9 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
BBS1Q8NFJ9 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.49□□□□□ -0.41
BBS1Q8NFJ9 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms