Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.83□□□□□ -0.36
THBS1P07996 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.83□□□□□ -0.36
THBS1P07996 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
THBS1P07996 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
THBS1P07996 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
THBS1P07996 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
THBS1P07996 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
THBS1P07996 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
THBS1P07996 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
THBS1P07996 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
THBS1P07996 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.82□□□□□ -0.36
THBS1P07996 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.82□□□□□ -0.36
THBS1P07996 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.82□□□□□ -0.36
THBS1P07996 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
THBS1P07996 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
THBS1P07996 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
THBS1P07996 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 AL662890.1-201ENST00000396818 632 ntBASIC12.82□□□□□ -0.36
THBS1P07996 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.82□□□□□ -0.36
THBS1P07996 HLA-DPB2-205ENST00000435074 1188 ntBASIC12.82□□□□□ -0.36
THBS1P07996 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 AL596276.2-201ENST00000447525 331 ntBASIC12.82□□□□□ -0.36
THBS1P07996 KATNBL1P4-201ENST00000503545 918 ntBASIC12.82□□□□□ -0.36
THBS1P07996 COQ10BP2-201ENST00000513804 724 ntBASIC12.82□□□□□ -0.36
THBS1P07996 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.82□□□□□ -0.36
THBS1P07996 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.82□□□□□ -0.36
THBS1P07996 KRT8P2-201ENST00000556193 944 ntBASIC12.82□□□□□ -0.36
THBS1P07996 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC12.82□□□□□ -0.36
THBS1P07996 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
THBS1P07996 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.82□□□□□ -0.36
THBS1P07996 AC132825.4-202ENST00000578792 434 ntBASIC12.82□□□□□ -0.36
THBS1P07996 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.82□□□□□ -0.36
THBS1P07996 AC138627.1-207ENST00000641560 1006 ntBASIC12.82□□□□□ -0.36
THBS1P07996 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
THBS1P07996 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.82□□□□□ -0.36
THBS1P07996 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.82□□□□□ -0.36
THBS1P07996 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.82□□□□□ -0.36
THBS1P07996 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
THBS1P07996 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.81□□□□□ -0.36
THBS1P07996 POM121L14P-201ENST00000406100 1558 ntBASIC12.81□□□□□ -0.36
THBS1P07996 TBC1D27-202ENST00000424239 1573 ntBASIC12.81□□□□□ -0.36
THBS1P07996 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
THBS1P07996 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
THBS1P07996 AP002761.4-201ENST00000565433 3361 ntBASIC12.81□□□□□ -0.36
THBS1P07996 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.81□□□□□ -0.36
THBS1P07996 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
THBS1P07996 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
THBS1P07996 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
THBS1P07996 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.81□□□□□ -0.36
THBS1P07996 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
THBS1P07996 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
THBS1P07996 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.81□□□□□ -0.36
THBS1P07996 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.81□□□□□ -0.36
THBS1P07996 AC073869.2-201ENST00000417338 1026 ntBASIC12.81□□□□□ -0.36
THBS1P07996 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 AC005722.1-201ENST00000431878 964 ntBASIC12.81□□□□□ -0.36
THBS1P07996 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.81□□□□□ -0.36
THBS1P07996 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.81□□□□□ -0.36
THBS1P07996 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.81□□□□□ -0.36
THBS1P07996 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC12.81□□□□□ -0.36
THBS1P07996 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
THBS1P07996 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC12.81□□□□□ -0.36
THBS1P07996 COG4-212ENST00000564653 590 ntTSL 5 BASIC12.81□□□□□ -0.36
THBS1P07996 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
THBS1P07996 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.81□□□□□ -0.36
THBS1P07996 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.81□□□□□ -0.36
THBS1P07996 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC12.81□□□□□ -0.36
THBS1P07996 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms