Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.41□□□□□ -0.42
ZIC3O60481 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.41□□□□□ -0.42
ZIC3O60481 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.41□□□□□ -0.42
ZIC3O60481 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.41□□□□□ -0.42
ZIC3O60481 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.41□□□□□ -0.42
ZIC3O60481 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
ZIC3O60481 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC12.41□□□□□ -0.42
ZIC3O60481 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.41□□□□□ -0.42
ZIC3O60481 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
ZIC3O60481 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
ZIC3O60481 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC12.41□□□□□ -0.42
ZIC3O60481 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC12.41□□□□□ -0.42
ZIC3O60481 LINP1-201ENST00000417112 917 ntTSL 2 BASIC12.41□□□□□ -0.42
ZIC3O60481 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC12.41□□□□□ -0.42
ZIC3O60481 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC12.41□□□□□ -0.42
ZIC3O60481 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC12.41□□□□□ -0.42
ZIC3O60481 AC009474.1-201ENST00000455096 1565 ntBASIC12.41□□□□□ -0.42
ZIC3O60481 AC079250.1-201ENST00000456046 531 ntBASIC12.41□□□□□ -0.42
ZIC3O60481 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
ZIC3O60481 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC12.41□□□□□ -0.42
ZIC3O60481 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
ZIC3O60481 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.41□□□□□ -0.42
ZIC3O60481 MT3-202ENST00000561640 514 ntTSL 3 BASIC12.41□□□□□ -0.42
ZIC3O60481 COX5A-205ENST00000568517 582 ntTSL 3 BASIC12.41□□□□□ -0.42
ZIC3O60481 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC12.41□□□□□ -0.42
ZIC3O60481 AC132812.1-201ENST00000583145 892 ntBASIC12.41□□□□□ -0.42
ZIC3O60481 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ZIC3O60481 AC108024.1-201ENST00000626286 1721 ntBASIC12.41□□□□□ -0.42
ZIC3O60481 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC12.41□□□□□ -0.42
ZIC3O60481 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ZIC3O60481 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
ZIC3O60481 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
ZIC3O60481 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.41□□□□□ -0.42
ZIC3O60481 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 AL513497.1-201ENST00000624273 2083 ntBASIC12.41□□□□□ -0.42
ZIC3O60481 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZIC3O60481 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ZIC3O60481 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC12.4□□□□□ -0.42
ZIC3O60481 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC12.4□□□□□ -0.42
ZIC3O60481 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
ZIC3O60481 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 AC092115.1-201ENST00000566277 1402 ntBASIC12.4□□□□□ -0.42
ZIC3O60481 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
ZIC3O60481 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
ZIC3O60481 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 AC108734.2-201ENST00000420887 1069 ntBASIC12.4□□□□□ -0.42
ZIC3O60481 AC041040.1-201ENST00000425197 460 ntBASIC12.4□□□□□ -0.42
ZIC3O60481 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC12.4□□□□□ -0.42
ZIC3O60481 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC12.4□□□□□ -0.42
ZIC3O60481 LINC00634-202ENST00000505157 222 ntBASIC12.4□□□□□ -0.42
ZIC3O60481 RPS23-207ENST00000511844 530 ntTSL 2 BASIC12.4□□□□□ -0.42
ZIC3O60481 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ZIC3O60481 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC12.4□□□□□ -0.42
ZIC3O60481 DLK1-205ENST00000556051 469 ntTSL 2 BASIC12.4□□□□□ -0.42
ZIC3O60481 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC12.4□□□□□ -0.42
ZIC3O60481 U62317.3-201ENST00000608319 855 ntBASIC12.4□□□□□ -0.42
ZIC3O60481 AC138466.5-201ENST00000624002 808 ntBASIC12.4□□□□□ -0.42
ZIC3O60481 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.4□□□□□ -0.42
ZIC3O60481 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms