Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 CCND3P1-201ENST00000438347 580 ntBASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 RPL29P2-201ENST00000488409 460 ntBASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 RNA5SP420-201ENST00000516997 137 ntBASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 AL591926.3-201ENST00000611630 238 ntBASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 FAM226B-201ENST00000602508 1490 ntBASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
SYNPO2Q9UMS6 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 SLC9A3P3-201ENST00000457608 2229 ntBASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 CCL19-202ENST00000378800 414 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 AL136084.1-201ENST00000449172 318 ntBASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 AC092896.1-201ENST00000465850 380 ntBASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 BCRP4-201ENST00000506079 804 ntBASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 OR4A49P-201ENST00000527050 632 ntBASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 AC004801.1-201ENST00000549557 360 ntBASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 AC091304.3-201ENST00000566500 716 ntBASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 LINC00643-207ENST00000637212 734 ntBASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms