Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC13.93□□□□□ -0.18
AP1S1P61966 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.93□□□□□ -0.18
AP1S1P61966 MIR3147-201ENST00000577811 66 ntBASIC13.93□□□□□ -0.18
AP1S1P61966 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC13.93□□□□□ -0.18
AP1S1P61966 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC13.93□□□□□ -0.18
AP1S1P61966 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.93□□□□□ -0.18
AP1S1P61966 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
AP1S1P61966 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
AP1S1P61966 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.93□□□□□ -0.18
AP1S1P61966 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC13.93□□□□□ -0.18
AP1S1P61966 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
AP1S1P61966 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.92□□□□□ -0.18
AP1S1P61966 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S1P61966 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
AP1S1P61966 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S1P61966 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S1P61966 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.92□□□□□ -0.18
AP1S1P61966 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S1P61966 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S1P61966 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.92□□□□□ -0.18
AP1S1P61966 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S1P61966 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S1P61966 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.92□□□□□ -0.18
AP1S1P61966 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S1P61966 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S1P61966 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S1P61966 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S1P61966 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S1P61966 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC13.92□□□□□ -0.18
AP1S1P61966 RPSAP31-201ENST00000416648 895 ntBASIC13.92□□□□□ -0.18
AP1S1P61966 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC13.92□□□□□ -0.18
AP1S1P61966 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC13.92□□□□□ -0.18
AP1S1P61966 AC006529.1-201ENST00000459978 637 ntBASIC13.92□□□□□ -0.18
AP1S1P61966 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC13.92□□□□□ -0.18
AP1S1P61966 CR383656.3-201ENST00000551315 183 ntBASIC13.92□□□□□ -0.18
AP1S1P61966 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC13.92□□□□□ -0.18
AP1S1P61966 DBP-202ENST00000593500 712 ntTSL 2 BASIC13.92□□□□□ -0.18
AP1S1P61966 AC018635.2-201ENST00000608625 364 ntBASIC13.92□□□□□ -0.18
AP1S1P61966 AC073911.3-201ENST00000624401 631 ntBASIC13.92□□□□□ -0.18
AP1S1P61966 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S1P61966 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.92□□□□□ -0.18
AP1S1P61966 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S1P61966 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S1P61966 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S1P61966 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
AP1S1P61966 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S1P61966 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S1P61966 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.92□□□□□ -0.18
AP1S1P61966 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
AP1S1P61966 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S1P61966 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.92□□□□□ -0.18
AP1S1P61966 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.91□□□□□ -0.18
AP1S1P61966 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
AP1S1P61966 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.91□□□□□ -0.18
AP1S1P61966 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
AP1S1P61966 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
AP1S1P61966 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
AP1S1P61966 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
AP1S1P61966 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.91□□□□□ -0.18
AP1S1P61966 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.91□□□□□ -0.18
AP1S1P61966 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC13.91□□□□□ -0.18
AP1S1P61966 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.91□□□□□ -0.18
AP1S1P61966 OR7E115P-201ENST00000382617 1024 ntBASIC13.91□□□□□ -0.18
AP1S1P61966 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
AP1S1P61966 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC13.91□□□□□ -0.18
AP1S1P61966 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 AC005077.3-201ENST00000449614 213 ntBASIC13.91□□□□□ -0.18
AP1S1P61966 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.91□□□□□ -0.18
AP1S1P61966 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC13.91□□□□□ -0.18
AP1S1P61966 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.91□□□□□ -0.18
AP1S1P61966 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC13.91□□□□□ -0.18
AP1S1P61966 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 VENTXP3-201ENST00000546480 773 ntBASIC13.91□□□□□ -0.18
AP1S1P61966 NPM1P43-201ENST00000558669 786 ntBASIC13.91□□□□□ -0.18
AP1S1P61966 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms