Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 FNBP4-201ENST00000263773 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 SLIT2-201ENST00000273739 5132 ntTSL 5 BASIC12.14□□□□□ -0.47
DEFA3P59666 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.14□□□□□ -0.47
DEFA3P59666 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
DEFA3P59666 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 RNA5SP415-201ENST00000517246 115 ntBASIC12.14□□□□□ -0.47
DEFA3P59666 ALG1L8P-201ENST00000533887 760 ntBASIC12.14□□□□□ -0.47
DEFA3P59666 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.14□□□□□ -0.47
DEFA3P59666 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.14□□□□□ -0.47
DEFA3P59666 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
DEFA3P59666 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.14□□□□□ -0.47
DEFA3P59666 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC12.14□□□□□ -0.47
DEFA3P59666 DCT-201ENST00000377028 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
DEFA3P59666 NPHS1-202ENST00000378910 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 COL9A1-202ENST00000357250 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
DEFA3P59666 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 TRPV1-204ENST00000425167 2607 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 AC018645.3-201ENST00000628855 2646 ntBASIC12.14□□□□□ -0.47
DEFA3P59666 ANXA11-205ENST00000438331 6965 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 AL135999.1-201ENST00000555968 3243 ntTSL 2 BASIC12.14□□□□□ -0.47
DEFA3P59666 AC006037.2-201ENST00000622975 2232 ntBASIC12.14□□□□□ -0.47
DEFA3P59666 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC12.14□□□□□ -0.47
DEFA3P59666 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 ZNF630-206ENST00000442455 2829 ntAPPRIS P2 TSL 4 BASIC12.14□□□□□ -0.47
DEFA3P59666 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 NSD3-202ENST00000317025 10776 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 KRT17P7-202ENST00000582261 2334 ntTSL 5 BASIC12.14□□□□□ -0.47
DEFA3P59666 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC12.14□□□□□ -0.47
DEFA3P59666 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA3P59666 PES1-203ENST00000402281 2760 ntTSL 2 BASIC12.13□□□□□ -0.47
DEFA3P59666 ASAP3-201ENST00000336689 4050 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA3P59666 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
DEFA3P59666 SHPRH-201ENST00000275233 6649 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA3P59666 GPR37L1-201ENST00000367282 6588 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA3P59666 FAM156B-203ENST00000593751 2942 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
DEFA3P59666 FAM156A-201ENST00000596733 2942 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
DEFA3P59666 STX16-205ENST00000361830 4318 ntTSL 5 BASIC12.13□□□□□ -0.47
DEFA3P59666 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA3P59666 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC12.13□□□□□ -0.47
DEFA3P59666 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.13□□□□□ -0.47
DEFA3P59666 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.13□□□□□ -0.47
DEFA3P59666 BX284668.4-201ENST00000453917 508 ntBASIC12.13□□□□□ -0.47
DEFA3P59666 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12.13□□□□□ -0.47
DEFA3P59666 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.13□□□□□ -0.47
DEFA3P59666 AC026410.3-201ENST00000514280 936 ntBASIC12.13□□□□□ -0.47
DEFA3P59666 KRT8P48-201ENST00000515599 1220 ntBASIC12.13□□□□□ -0.47
DEFA3P59666 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.13□□□□□ -0.47
DEFA3P59666 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.13□□□□□ -0.47
DEFA3P59666 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.13□□□□□ -0.47
DEFA3P59666 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.13□□□□□ -0.47
DEFA3P59666 AL589739.1-201ENST00000607720 493 ntBASIC12.13□□□□□ -0.47
DEFA3P59666 AC064836.3-201ENST00000607928 673 ntBASIC12.13□□□□□ -0.47
DEFA3P59666 AC139530.3-201ENST00000620344 690 ntBASIC12.13□□□□□ -0.47
DEFA3P59666 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.13□□□□□ -0.47
DEFA3P59666 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA3P59666 UBOX5-202ENST00000348031 4469 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA3P59666 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC12.13□□□□□ -0.47
DEFA3P59666 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA3P59666 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA3P59666 AC104590.1-202ENST00000558368 1921 ntBASIC12.13□□□□□ -0.47
DEFA3P59666 TRPC4-206ENST00000379705 4059 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA3P59666 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA3P59666 COL20A1-201ENST00000358894 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA3P59666 ARHGEF10-204ENST00000398564 5480 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
DEFA3P59666 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA3P59666 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA3P59666 TEX13D-201ENST00000632372 4203 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
DEFA3P59666 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC12.12□□□□□ -0.47
DEFA3P59666 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
DEFA3P59666 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
DEFA3P59666 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DEFA3P59666 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DEFA3P59666 ARHGAP36-202ENST00000370921 2447 ntTSL 2 BASIC12.12□□□□□ -0.47
DEFA3P59666 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DEFA3P59666 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.12□□□□□ -0.47
DEFA3P59666 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
DEFA3P59666 CETN4P-206ENST00000642099 2168 ntBASIC12.12□□□□□ -0.47
DEFA3P59666 MPP2-202ENST00000377184 4206 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
DEFA3P59666 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DEFA3P59666 DNMBP-201ENST00000324109 6400 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DEFA3P59666 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DEFA3P59666 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
DEFA3P59666 ATF4P4-201ENST00000393544 1930 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms