RNA–Protein interactions for RNA: ENST00000317025.12

NSD3-202, Transcript of nuclear receptor binding SET domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSD3, Length 10,776 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSD3-202ENST00000317025 DCAF8L2P0C7V8 631 aa19.73■□□□□ 0.75
NSD3-202ENST00000317025 NISCHQ9Y2I1 1504 aa19.37■□□□□ 0.69
NSD3-202ENST00000317025 SUPT5HO00267 1087 aaKnown RBP19.11■□□□□ 0.65
NSD3-202ENST00000317025 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
NSD3-202ENST00000317025 PELP1Q8IZL8 1130 aaKnown RBP18.57■□□□□ 0.56
NSD3-202ENST00000317025 EHMT2Q96KQ7 1210 aa18.55■□□□□ 0.56
NSD3-202ENST00000317025 PCGF6Q9BYE7 350 aa18.24■□□□□ 0.51
NSD3-202ENST00000317025 APLP2Q06481 763 aa18.16■□□□□ 0.5
NSD3-202ENST00000317025 TTBK1Q5TCY1 1321 aaPredicted RBP18.04■□□□□ 0.48
NSD3-202ENST00000317025 FAM9AQ8IZU1 332 aaPredicted RBP18.01■□□□□ 0.47
NSD3-202ENST00000317025 CENPBP07199 599 aaPredicted RBP17.95■□□□□ 0.46
NSD3-202ENST00000317025 ZEB1P37275 1124 aaPredicted RBP17.9■□□□□ 0.46
NSD3-202ENST00000317025 CCER1Q8TC90 406 aaPredicted RBP17.78■□□□□ 0.44
NSD3-202ENST00000317025 ERICH6Q7L0X2 663 aa17.74■□□□□ 0.43
NSD3-202ENST00000317025 TRIM41Q8WV44 630 aa17.68■□□□□ 0.42
NSD3-202ENST00000317025 RANGAP1P46060 587 aaPredicted RBP17.65■□□□□ 0.42
NSD3-202ENST00000317025 MYT1Q01538 1121 aa17.6■□□□□ 0.41
NSD3-202ENST00000317025 YTHDC1Q96MU7 727 aaKnown RBP17.59■□□□□ 0.41
NSD3-202ENST00000317025 NEFLP07196 543 aa17.52■□□□□ 0.4
NSD3-202ENST00000317025 UBTFP17480 764 aaKnown RBP17.49■□□□□ 0.39
NSD3-202ENST00000317025 ATP1B4Q9UN42 357 aaPredicted RBP17.38■□□□□ 0.37
NSD3-202ENST00000317025 HRCP23327 699 aa17.37■□□□□ 0.37
NSD3-202ENST00000317025 TRIM26Q12899 539 aaPredicted RBP17.36■□□□□ 0.37
NSD3-202ENST00000317025 PPARGC1BQ86YN6 1023 aaKnown RBP17.36■□□□□ 0.37
NSD3-202ENST00000317025 LOC105371045A0A1W2PR82 267 aa17.05■□□□□ 0.32
NSD3-202ENST00000317025 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.32
NSD3-202ENST00000317025 DAXXQ9UER7 740 aaPredicted RBP16.99■□□□□ 0.31
NSD3-202ENST00000317025 ITGAEP38570 1179 aa16.96■□□□□ 0.31
NSD3-202ENST00000317025 HNRNPUL2Q1KMD3 747 aaKnown RBP16.92■□□□□ 0.3
NSD3-202ENST00000317025 DIEXFQ68CQ4 756 aaKnown RBP16.88■□□□□ 0.29
NSD3-202ENST00000317025 POLR3GLQ9BT43 218 aa16.88■□□□□ 0.29
NSD3-202ENST00000317025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.86■□□□□ 0.29
NSD3-202ENST00000317025 CNGB1Q14028 1251 aaPredicted RBP16.72■□□□□ 0.27
NSD3-202ENST00000317025 RTL5Q5HYW3 569 aaPredicted RBP16.7■□□□□ 0.26
NSD3-202ENST00000317025 ZNF316A6NFI3 1004 aaPredicted RBP16.65■□□□□ 0.26
NSD3-202ENST00000317025 GTF3C3Q9Y5Q9 886 aa16.62■□□□□ 0.25
NSD3-202ENST00000317025 MYT1LQ9UL68 1186 aa16.56■□□□□ 0.24
NSD3-202ENST00000317025 BCANQ96GW7 911 aa16.55■□□□□ 0.24
NSD3-202ENST00000317025 FAM50AQ14320 339 aaKnown RBP16.53■□□□□ 0.24
NSD3-202ENST00000317025 CLSPNQ9HAW4 1339 aa16.53■□□□□ 0.24
NSD3-202ENST00000317025 SLC4A1APQ9BWU0 796 aaKnown RBP16.45■□□□□ 0.22
NSD3-202ENST00000317025 NEUROD1Q13562 356 aa16.45■□□□□ 0.22
NSD3-202ENST00000317025 ANP32CO43423 234 aa16.41■□□□□ 0.22
NSD3-202ENST00000317025 ACIN1Q9UKV3 1341 aaKnown RBP16.38■□□□□ 0.21
NSD3-202ENST00000317025 SCRIBQ14160 1630 aa16.37■□□□□ 0.21
NSD3-202ENST00000317025 CDK11AQ9UQ88 783 aaPredicted RBP16.37■□□□□ 0.21
NSD3-202ENST00000317025 TRIM52Q96A61 297 aa16.35■□□□□ 0.21
NSD3-202ENST00000317025 ABCC9O60706 1549 aa16.34■□□□□ 0.21
NSD3-202ENST00000317025 DCAF1Q9Y4B6 1507 aa16.34■□□□□ 0.21
NSD3-202ENST00000317025 ZNF326Q5BKZ1 582 aaKnown RBP16.31■□□□□ 0.2
NSD3-202ENST00000317025 CCDC180Q9P1Z9 1646 aa16.29■□□□□ 0.2
NSD3-202ENST00000317025 ANP32AP39687 249 aaKnown RBP16.18■□□□□ 0.18
NSD3-202ENST00000317025 PABPN1Q86U42 306 aaKnown RBP eCLIP16.17■□□□□ 0.18
NSD3-202ENST00000317025 CANXP27824 592 aaKnown RBP16.16■□□□□ 0.18
NSD3-202ENST00000317025 ZBTB47Q9UFB7 747 aaPredicted RBP16.1■□□□□ 0.17
NSD3-202ENST00000317025 ZCCHC6Q5VYS8 1495 aaKnown RBP16.08■□□□□ 0.16
NSD3-202ENST00000317025 NPM2Q86SE8 214 aaKnown RBP16.05■□□□□ 0.16
NSD3-202ENST00000317025 BCL11AQ9H165 835 aa16.02■□□□□ 0.16
NSD3-202ENST00000317025 FKBP8Q14318 412 aa16.01■□□□□ 0.15
NSD3-202ENST00000317025 TONSLQ96HA7 1378 aa16■□□□□ 0.15
NSD3-202ENST00000317025 CSRNP3Q8WYN3 585 aa16■□□□□ 0.15
NSD3-202ENST00000317025 MYO15BQ96JP2 1530 aa15.98■□□□□ 0.15
NSD3-202ENST00000317025 SCAF1Q9H7N4 1312 aaKnown RBP15.97■□□□□ 0.15
NSD3-202ENST00000317025 P3H3Q8IVL6 736 aa15.97■□□□□ 0.15
NSD3-202ENST00000317025 ARID3CA6NKF2 412 aa15.96■□□□□ 0.15
NSD3-202ENST00000317025 HNRNPUQ00839 825 aaKnown RBP eCLIP15.91■□□□□ 0.14
NSD3-202ENST00000317025 FBLN2P98095 1184 aa15.89■□□□□ 0.13
NSD3-202ENST00000317025 EIF5BO60841 1220 aaKnown RBP15.88■□□□□ 0.13
NSD3-202ENST00000317025 DDX10Q13206 875 aaKnown RBP15.87■□□□□ 0.13
NSD3-202ENST00000317025 NEFMP07197 916 aa15.86■□□□□ 0.13
NSD3-202ENST00000317025 NBR1Q14596 966 aa15.85■□□□□ 0.13
NSD3-202ENST00000317025 SLC24A1O60721 1099 aa15.85■□□□□ 0.13
NSD3-202ENST00000317025 HSP90AA1P07900 732 aaKnown RBP15.84■□□□□ 0.13
NSD3-202ENST00000317025 ANP32BQ92688 251 aaKnown RBP15.82■□□□□ 0.12
NSD3-202ENST00000317025 FAM9BQ8IZU0 186 aa15.82■□□□□ 0.12
NSD3-202ENST00000317025 ZNF777Q9ULD5 760 aaPredicted RBP15.81■□□□□ 0.12
NSD3-202ENST00000317025 CLIP1P30622 1438 aa15.79■□□□□ 0.12
NSD3-202ENST00000317025 UPF2Q9HAU5 1272 aaKnown RBP15.79■□□□□ 0.12
NSD3-202ENST00000317025 CCDC136Q96JN2 1154 aa15.79■□□□□ 0.12
NSD3-202ENST00000317025 MIER1Q8N108 512 aa15.78■□□□□ 0.12
NSD3-202ENST00000317025 IRX6P78412 446 aaPredicted RBP15.7■□□□□ 0.1
NSD3-202ENST00000317025 MRS2Q9HD23 443 aa15.69■□□□□ 0.1
NSD3-202ENST00000317025 CEP162Q5TB80 1403 aa15.69■□□□□ 0.1
NSD3-202ENST00000317025 GLIPR1L2Q4G1C9 344 aa15.69■□□□□ 0.1
NSD3-202ENST00000317025 TMC1Q8TDI8 760 aa15.67■□□□□ 0.1
NSD3-202ENST00000317025 ARXQ96QS3 562 aa15.67■□□□□ 0.1
NSD3-202ENST00000317025 SALL2Q9Y467 1007 aaPredicted RBP15.67■□□□□ 0.1
NSD3-202ENST00000317025 GOLGA3Q08378 1498 aa15.65■□□□□ 0.1
NSD3-202ENST00000317025 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.65■□□□□ 0.1
NSD3-202ENST00000317025 CHIC2Q9UKJ5 165 aa15.62■□□□□ 0.09
NSD3-202ENST00000317025 MTUS2Q5JR59 1369 aa15.61■□□□□ 0.09
NSD3-202ENST00000317025 RB1CC1Q8TDY2 1594 aa15.61■□□□□ 0.09
NSD3-202ENST00000317025 HIRIP3Q9BW71 556 aaPredicted RBP15.6■□□□□ 0.09
NSD3-202ENST00000317025 EEA1Q15075 1411 aa15.57■□□□□ 0.08
NSD3-202ENST00000317025 WDR43Q15061 677 aaKnown RBP eCLIP15.57■□□□□ 0.08
NSD3-202ENST00000317025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.52■□□□□ 0.082e-6■■□□□ 12
NSD3-202ENST00000317025 CHGAP10645 457 aaKnown RBP15.52■□□□□ 0.07
NSD3-202ENST00000317025 KDM2AQ9Y2K7 1162 aa15.51■□□□□ 0.07
NSD3-202ENST00000317025 ANP32EQ9BTT0 268 aa15.49■□□□□ 0.07
NSD3-202ENST00000317025 DDRGK1Q96HY6 314 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms