Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
POLR3DP05423 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.59■□□□□ 0.25
POLR3DP05423 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
POLR3DP05423 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR3DP05423 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR3DP05423 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR3DP05423 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR3DP05423 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR3DP05423 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR3DP05423 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
POLR3DP05423 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR3DP05423 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR3DP05423 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
POLR3DP05423 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR3DP05423 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR3DP05423 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR3DP05423 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR3DP05423 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR3DP05423 OR2W2P-201ENST00000406313 909 ntBASIC16.59■□□□□ 0.25
POLR3DP05423 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR3DP05423 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.59■□□□□ 0.25
POLR3DP05423 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.59■□□□□ 0.25
POLR3DP05423 RPL35P9-201ENST00000446059 350 ntBASIC16.59■□□□□ 0.25
POLR3DP05423 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.59■□□□□ 0.25
POLR3DP05423 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.59■□□□□ 0.25
POLR3DP05423 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.59■□□□□ 0.25
POLR3DP05423 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR3DP05423 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.59■□□□□ 0.25
POLR3DP05423 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.59■□□□□ 0.25
POLR3DP05423 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR3DP05423 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
POLR3DP05423 CICP17-201ENST00000418553 2377 ntBASIC16.59■□□□□ 0.25
POLR3DP05423 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR3DP05423 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
POLR3DP05423 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR3DP05423 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.59■□□□□ 0.25
POLR3DP05423 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR3DP05423 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR3DP05423 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR3DP05423 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR3DP05423 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR3DP05423 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
POLR3DP05423 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR3DP05423 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR3DP05423 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR3DP05423 CROT-203ENST00000419147 2959 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR3DP05423 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR3DP05423 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR3DP05423 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
POLR3DP05423 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
POLR3DP05423 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.58■□□□□ 0.25
POLR3DP05423 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
POLR3DP05423 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC16.58■□□□□ 0.25
POLR3DP05423 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
POLR3DP05423 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
POLR3DP05423 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
POLR3DP05423 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
POLR3DP05423 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR3DP05423 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
POLR3DP05423 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR3DP05423 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
POLR3DP05423 AL357563.1-201ENST00000404728 395 ntBASIC16.58■□□□□ 0.24
POLR3DP05423 MIR1307-201ENST00000408840 149 ntBASIC16.58■□□□□ 0.24
POLR3DP05423 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.58■□□□□ 0.24
POLR3DP05423 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR3DP05423 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC16.58■□□□□ 0.24
POLR3DP05423 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC16.58■□□□□ 0.24
POLR3DP05423 RN7SL23P-201ENST00000484055 275 ntBASIC16.58■□□□□ 0.24
POLR3DP05423 RN7SL818P-201ENST00000485099 259 ntBASIC16.58■□□□□ 0.24
POLR3DP05423 AC084752.1-201ENST00000509766 622 ntBASIC16.58■□□□□ 0.24
POLR3DP05423 AC100858.1-201ENST00000514059 1228 ntBASIC16.58■□□□□ 0.24
POLR3DP05423 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.58■□□□□ 0.24
POLR3DP05423 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
POLR3DP05423 AL049840.2-201ENST00000602722 535 ntBASIC16.58■□□□□ 0.24
POLR3DP05423 RN7SL725P-201ENST00000606439 259 ntBASIC16.58■□□□□ 0.24
POLR3DP05423 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR3DP05423 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR3DP05423 AC021305.1-201ENST00000520656 1514 ntBASIC16.58■□□□□ 0.24
POLR3DP05423 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR3DP05423 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR3DP05423 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
POLR3DP05423 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.58■□□□□ 0.24
POLR3DP05423 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR3DP05423 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR3DP05423 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
POLR3DP05423 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC16.58■□□□□ 0.24
POLR3DP05423 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
POLR3DP05423 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.58■□□□□ 0.24
POLR3DP05423 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
POLR3DP05423 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
POLR3DP05423 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR3DP05423 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC16.58■□□□□ 0.24
POLR3DP05423 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
POLR3DP05423 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR3DP05423 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms