Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 ICK-202ENST00000356971 6227 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
IFNA1P01562 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
IFNA1P01562 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
IFNA1P01562 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
IFNA1P01562 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 ORAI2-210ENST00000611770 10679 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
IFNA1P01562 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC11□□□□□ -0.65
IFNA1P01562 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
IFNA1P01562 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
IFNA1P01562 QRICH2-201ENST00000262765 5357 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.65
IFNA1P01562 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.65
IFNA1P01562 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC10.99□□□□□ -0.65
IFNA1P01562 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC10.99□□□□□ -0.65
IFNA1P01562 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
IFNA1P01562 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 MIR1224-201ENST00000408193 85 ntBASIC10.99□□□□□ -0.65
IFNA1P01562 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC10.99□□□□□ -0.65
IFNA1P01562 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC10.99□□□□□ -0.65
IFNA1P01562 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC10.99□□□□□ -0.65
IFNA1P01562 HTR5BP-201ENST00000430851 1154 ntBASIC10.99□□□□□ -0.65
IFNA1P01562 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC10.99□□□□□ -0.65
IFNA1P01562 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC10.99□□□□□ -0.65
IFNA1P01562 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC10.99□□□□□ -0.65
IFNA1P01562 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC10.99□□□□□ -0.65
IFNA1P01562 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC10.99□□□□□ -0.65
IFNA1P01562 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC10.99□□□□□ -0.65
IFNA1P01562 KRT18P25-201ENST00000508931 1278 ntBASIC10.99□□□□□ -0.65
IFNA1P01562 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC10.99□□□□□ -0.65
IFNA1P01562 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC10.99□□□□□ -0.65
IFNA1P01562 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC10.99□□□□□ -0.65
IFNA1P01562 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC10.99□□□□□ -0.65
IFNA1P01562 ZNF890P-202ENST00000530367 1156 ntBASIC10.99□□□□□ -0.65
IFNA1P01562 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC10.99□□□□□ -0.65
IFNA1P01562 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC10.99□□□□□ -0.65
IFNA1P01562 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC10.99□□□□□ -0.65
IFNA1P01562 AC120045.2-201ENST00000567334 178 ntBASIC10.99□□□□□ -0.65
IFNA1P01562 IFT20-206ENST00000578122 834 ntTSL 2 BASIC10.99□□□□□ -0.65
IFNA1P01562 IFT20-208ENST00000578985 831 ntTSL 3 BASIC10.99□□□□□ -0.65
IFNA1P01562 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC10.99□□□□□ -0.65
IFNA1P01562 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC10.99□□□□□ -0.65
IFNA1P01562 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC10.99□□□□□ -0.65
IFNA1P01562 AP001059.3-201ENST00000619053 235 ntBASIC10.99□□□□□ -0.65
IFNA1P01562 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
IFNA1P01562 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
IFNA1P01562 FKBP4P6-201ENST00000457486 1332 ntBASIC10.99□□□□□ -0.65
IFNA1P01562 SPTBN5-201ENST00000320955 11725 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC10.99□□□□□ -0.65
IFNA1P01562 ZKSCAN3-201ENST00000252211 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC10.99□□□□□ -0.65
IFNA1P01562 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
IFNA1P01562 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC10.99□□□□□ -0.65
IFNA1P01562 INTS4P2-202ENST00000614726 2019 ntBASIC10.99□□□□□ -0.65
IFNA1P01562 TNS2-204ENST00000546602 4429 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
IFNA1P01562 ANXA11-205ENST00000438331 6965 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
IFNA1P01562 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC10.99□□□□□ -0.65
IFNA1P01562 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
IFNA1P01562 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC10.98□□□□□ -0.65
IFNA1P01562 MANEA-AS1-201ENST00000564541 2268 ntBASIC10.98□□□□□ -0.65
IFNA1P01562 SPRY4-201ENST00000344120 4938 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 CTAGE10P-201ENST00000318353 2408 ntBASIC10.98□□□□□ -0.65
IFNA1P01562 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 Z98885.3-201ENST00000624882 1757 ntBASIC10.98□□□□□ -0.65
IFNA1P01562 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 ZAN-207ENST00000620596 8396 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms