Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC15.13■□□□□ 0.01
CDKAL1Q5VV42 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 CES1P1-201ENST00000421606 1704 ntBASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 MIR645-201ENST00000385283 94 ntBASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 GGTLC4P-201ENST00000402176 664 ntBASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 COQ10BP2-201ENST00000513804 724 ntBASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 AC132825.4-202ENST00000578792 434 ntBASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 AC017083.2-201ENST00000608069 979 ntBASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 AL031673.1-201ENST00000611460 466 ntBASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 LINC02228-202ENST00000641261 2489 ntBASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 DDC-212ENST00000615193 1674 ntTSL 3 BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 TUBB1P2-201ENST00000422712 1306 ntBASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 TUBB1P1-201ENST00000503144 1300 ntBASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 POM121L4P-202ENST00000427789 1891 ntBASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CDKAL1Q5VV42 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKAL1Q5VV42 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKAL1Q5VV42 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC15.11■□□□□ 0.01
CDKAL1Q5VV42 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDKAL1Q5VV42 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKAL1Q5VV42 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKAL1Q5VV42 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms