Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 KRT8P19-201ENST00000551916 1455 ntBASIC12.81□□□□□ -0.36
CLDN20P56880 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDN20P56880 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
CLDN20P56880 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 AL583805.1-201ENST00000391389 531 ntBASIC12.81□□□□□ -0.36
CLDN20P56880 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDN20P56880 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDN20P56880 AC234782.1-201ENST00000451950 919 ntBASIC12.81□□□□□ -0.36
CLDN20P56880 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDN20P56880 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
CLDN20P56880 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CLDN20P56880 MIR3677-201ENST00000578964 60 ntBASIC12.81□□□□□ -0.36
CLDN20P56880 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDN20P56880 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDN20P56880 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDN20P56880 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDN20P56880 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CLDN20P56880 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CLDN20P56880 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.81□□□□□ -0.36
CLDN20P56880 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDN20P56880 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDN20P56880 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.8□□□□□ -0.36
CLDN20P56880 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CLDN20P56880 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDN20P56880 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.8□□□□□ -0.36
CLDN20P56880 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
CLDN20P56880 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CLDN20P56880 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CLDN20P56880 AC024075.2-201ENST00000598112 1473 ntBASIC12.8□□□□□ -0.36
CLDN20P56880 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.8□□□□□ -0.36
CLDN20P56880 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CLDN20P56880 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
CLDN20P56880 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
CLDN20P56880 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
CLDN20P56880 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.8□□□□□ -0.36
CLDN20P56880 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDN20P56880 AC136604.1-202ENST00000425471 771 ntBASIC12.8□□□□□ -0.36
CLDN20P56880 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.8□□□□□ -0.36
CLDN20P56880 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.8□□□□□ -0.36
CLDN20P56880 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.8□□□□□ -0.36
CLDN20P56880 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.8□□□□□ -0.36
CLDN20P56880 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CLDN20P56880 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CLDN20P56880 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
CLDN20P56880 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDN20P56880 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC12.8□□□□□ -0.36
CLDN20P56880 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDN20P56880 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.8□□□□□ -0.36
CLDN20P56880 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.8□□□□□ -0.36
CLDN20P56880 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDN20P56880 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDN20P56880 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
CLDN20P56880 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CLDN20P56880 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
CLDN20P56880 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.8□□□□□ -0.36
CLDN20P56880 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CLDN20P56880 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms