Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC13.52□□□□□ -0.25
CSNK1EP49674 MIR2278-201ENST00000516344 96 ntBASIC13.52□□□□□ -0.25
CSNK1EP49674 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.52□□□□□ -0.25
CSNK1EP49674 AC026120.2-201ENST00000617239 309 ntBASIC13.52□□□□□ -0.25
CSNK1EP49674 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC13.52□□□□□ -0.25
CSNK1EP49674 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC13.52□□□□□ -0.25
CSNK1EP49674 AC020931.1-201ENST00000589622 1346 ntBASIC13.52□□□□□ -0.25
CSNK1EP49674 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC13.52□□□□□ -0.25
CSNK1EP49674 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.52□□□□□ -0.25
CSNK1EP49674 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.52□□□□□ -0.25
CSNK1EP49674 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 AC023908.3-201ENST00000564211 3047 ntBASIC13.52□□□□□ -0.25
CSNK1EP49674 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
CSNK1EP49674 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.52□□□□□ -0.25
CSNK1EP49674 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CSNK1EP49674 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.51□□□□□ -0.25
CSNK1EP49674 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.51□□□□□ -0.25
CSNK1EP49674 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CSNK1EP49674 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CSNK1EP49674 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CSNK1EP49674 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.51□□□□□ -0.25
CSNK1EP49674 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CSNK1EP49674 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
CSNK1EP49674 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CSNK1EP49674 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.51□□□□□ -0.25
CSNK1EP49674 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC13.51□□□□□ -0.25
CSNK1EP49674 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.51□□□□□ -0.25
CSNK1EP49674 AC005089.1-201ENST00000619486 2241 ntBASIC13.51□□□□□ -0.25
CSNK1EP49674 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.51□□□□□ -0.25
CSNK1EP49674 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 HSPA7-201ENST00000445535 1927 ntBASIC13.51□□□□□ -0.25
CSNK1EP49674 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.51□□□□□ -0.25
CSNK1EP49674 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
CSNK1EP49674 GH1-203ENST00000351388 685 ntTSL 2 BASIC13.51□□□□□ -0.25
CSNK1EP49674 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 ZNF877P-201ENST00000437614 612 ntBASIC13.51□□□□□ -0.25
CSNK1EP49674 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC13.51□□□□□ -0.25
CSNK1EP49674 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC13.51□□□□□ -0.25
CSNK1EP49674 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 RPS18P9-201ENST00000482817 460 ntBASIC13.51□□□□□ -0.25
CSNK1EP49674 AC112250.1-201ENST00000504640 745 ntBASIC13.51□□□□□ -0.25
CSNK1EP49674 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC13.51□□□□□ -0.25
CSNK1EP49674 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC13.51□□□□□ -0.25
CSNK1EP49674 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC13.51□□□□□ -0.25
CSNK1EP49674 AC120498.7-201ENST00000562876 330 ntBASIC13.51□□□□□ -0.25
CSNK1EP49674 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 MIR4746-201ENST00000579802 71 ntBASIC13.51□□□□□ -0.25
CSNK1EP49674 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CSNK1EP49674 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC13.51□□□□□ -0.25
CSNK1EP49674 BAP1-211ENST00000615113 489 ntBASIC13.51□□□□□ -0.25
CSNK1EP49674 AC048382.6-201ENST00000621980 1223 ntBASIC13.51□□□□□ -0.25
CSNK1EP49674 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC13.51□□□□□ -0.25
CSNK1EP49674 AC010531.8-201ENST00000623341 685 ntBASIC13.51□□□□□ -0.25
CSNK1EP49674 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC13.51□□□□□ -0.25
CSNK1EP49674 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC13.51□□□□□ -0.25
CSNK1EP49674 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CSNK1EP49674 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CSNK1EP49674 AC139749.1-202ENST00000617529 3139 ntBASIC13.51□□□□□ -0.25
CSNK1EP49674 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CSNK1EP49674 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CSNK1EP49674 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1EP49674 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CSNK1EP49674 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms