Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.32■□□□□ 0.04
TM4SF4P48230 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TM4SF4P48230 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.32■□□□□ 0.04
TM4SF4P48230 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.32■□□□□ 0.04
TM4SF4P48230 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.32■□□□□ 0.04
TM4SF4P48230 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TM4SF4P48230 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.32■□□□□ 0.04
TM4SF4P48230 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.32■□□□□ 0.04
TM4SF4P48230 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TM4SF4P48230 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TM4SF4P48230 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TM4SF4P48230 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TM4SF4P48230 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC15.32■□□□□ 0.04
TM4SF4P48230 EEF1GP3-201ENST00000421044 1288 ntBASIC15.32■□□□□ 0.04
TM4SF4P48230 HNRNPA1P30-202ENST00000440699 997 ntBASIC15.32■□□□□ 0.04
TM4SF4P48230 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TM4SF4P48230 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC15.32■□□□□ 0.04
TM4SF4P48230 OR2A15P-201ENST00000463814 900 ntBASIC15.32■□□□□ 0.04
TM4SF4P48230 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
TM4SF4P48230 AC009238.3-201ENST00000512705 217 ntBASIC15.32■□□□□ 0.04
TM4SF4P48230 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC15.32■□□□□ 0.04
TM4SF4P48230 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TM4SF4P48230 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC15.32■□□□□ 0.04
TM4SF4P48230 AC012615.6-203ENST00000590531 272 ntTSL 2 BASIC15.32■□□□□ 0.04
TM4SF4P48230 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TM4SF4P48230 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC15.32■□□□□ 0.04
TM4SF4P48230 AC009061.2-202ENST00000602596 696 ntTSL 2 BASIC15.32■□□□□ 0.04
TM4SF4P48230 FRG2EP-201ENST00000634243 835 ntBASIC15.32■□□□□ 0.04
TM4SF4P48230 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TM4SF4P48230 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TM4SF4P48230 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TM4SF4P48230 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TM4SF4P48230 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TM4SF4P48230 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
TM4SF4P48230 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TM4SF4P48230 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TM4SF4P48230 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC15.32■□□□□ 0.04
TM4SF4P48230 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TM4SF4P48230 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TM4SF4P48230 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.32■□□□□ 0.04
TM4SF4P48230 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TM4SF4P48230 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TM4SF4P48230 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TM4SF4P48230 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TM4SF4P48230 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TM4SF4P48230 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.32■□□□□ 0.04
TM4SF4P48230 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC15.32■□□□□ 0.04
TM4SF4P48230 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TM4SF4P48230 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM4SF4P48230 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
TM4SF4P48230 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TM4SF4P48230 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TM4SF4P48230 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC15.31■□□□□ 0.04
TM4SF4P48230 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TM4SF4P48230 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM4SF4P48230 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TM4SF4P48230 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.31■□□□□ 0.04
TM4SF4P48230 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TM4SF4P48230 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TM4SF4P48230 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TM4SF4P48230 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TM4SF4P48230 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM4SF4P48230 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15.31■□□□□ 0.04
TM4SF4P48230 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TM4SF4P48230 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
TM4SF4P48230 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TM4SF4P48230 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TM4SF4P48230 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM4SF4P48230 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC15.31■□□□□ 0.04
TM4SF4P48230 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TM4SF4P48230 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM4SF4P48230 RNF7-202ENST00000393000 805 ntTSL 2 BASIC15.31■□□□□ 0.04
TM4SF4P48230 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC15.31■□□□□ 0.04
TM4SF4P48230 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC15.31■□□□□ 0.04
TM4SF4P48230 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC15.31■□□□□ 0.04
TM4SF4P48230 PARVG-208ENST00000466375 820 ntTSL 2 BASIC15.31■□□□□ 0.04
TM4SF4P48230 MTND6P4-201ENST00000506002 522 ntBASIC15.31■□□□□ 0.04
TM4SF4P48230 AC108082.1-201ENST00000510857 331 ntBASIC15.31■□□□□ 0.04
TM4SF4P48230 MYL6-210ENST00000548400 573 ntTSL 3 BASIC15.31■□□□□ 0.04
TM4SF4P48230 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC15.31■□□□□ 0.04
TM4SF4P48230 AC018868.2-201ENST00000559655 1259 ntBASIC15.31■□□□□ 0.04
TM4SF4P48230 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC15.31■□□□□ 0.04
TM4SF4P48230 AC108673.2-201ENST00000608909 565 ntBASIC15.31■□□□□ 0.04
TM4SF4P48230 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM4SF4P48230 AL356583.1-201ENST00000398739 1371 ntBASIC15.31■□□□□ 0.04
TM4SF4P48230 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM4SF4P48230 ZSCAN5DP-201ENST00000600684 1488 ntBASIC15.31■□□□□ 0.04
TM4SF4P48230 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TM4SF4P48230 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC15.31■□□□□ 0.04
TM4SF4P48230 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TM4SF4P48230 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC15.31■□□□□ 0.04
TM4SF4P48230 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TM4SF4P48230 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM4SF4P48230 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM4SF4P48230 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TM4SF4P48230 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TM4SF4P48230 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.31■□□□□ 0.04
TM4SF4P48230 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.3■□□□□ 0.04
TM4SF4P48230 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TM4SF4P48230 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 202.2 ms