Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC138392.1-201ENST00000427577 921 ntBASIC13.93□□□□□ -0.18
LTBRP36941 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC13.93□□□□□ -0.18
LTBRP36941 OR52X1P-201ENST00000446117 914 ntBASIC13.93□□□□□ -0.18
LTBRP36941 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC13.93□□□□□ -0.18
LTBRP36941 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC13.93□□□□□ -0.18
LTBRP36941 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC13.93□□□□□ -0.18
LTBRP36941 FPGT-205ENST00000482102 561 ntTSL 4 BASIC13.93□□□□□ -0.18
LTBRP36941 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC13.93□□□□□ -0.18
LTBRP36941 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC13.93□□□□□ -0.18
LTBRP36941 FOS-205ENST00000555242 629 ntTSL 2 BASIC13.93□□□□□ -0.18
LTBRP36941 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LTBRP36941 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC13.93□□□□□ -0.18
LTBRP36941 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC13.93□□□□□ -0.18
LTBRP36941 IGHV1OR16-3-201ENST00000568138 205 ntBASIC13.93□□□□□ -0.18
LTBRP36941 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBRP36941 FAM223B-202ENST00000598177 713 ntBASIC13.93□□□□□ -0.18
LTBRP36941 AL356740.1-201ENST00000602192 1297 ntBASIC13.93□□□□□ -0.18
LTBRP36941 AL109983.1-201ENST00000603234 646 ntBASIC13.93□□□□□ -0.18
LTBRP36941 AL033381.2-201ENST00000603854 732 ntBASIC13.93□□□□□ -0.18
LTBRP36941 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC13.93□□□□□ -0.18
LTBRP36941 AL158032.2-201ENST00000616818 195 ntBASIC13.93□□□□□ -0.18
LTBRP36941 FAM223A-202ENST00000625204 713 ntBASIC13.93□□□□□ -0.18
LTBRP36941 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LTBRP36941 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
LTBRP36941 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBRP36941 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
LTBRP36941 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBRP36941 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LTBRP36941 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBRP36941 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.93□□□□□ -0.18
LTBRP36941 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LTBRP36941 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LTBRP36941 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
LTBRP36941 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBRP36941 AC097359.2-201ENST00000604992 2389 ntBASIC13.93□□□□□ -0.18
LTBRP36941 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LTBRP36941 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
LTBRP36941 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 AC069061.4-201ENST00000581294 1347 ntBASIC13.92□□□□□ -0.18
LTBRP36941 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LTBRP36941 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC13.92□□□□□ -0.18
LTBRP36941 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.92□□□□□ -0.18
LTBRP36941 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LTBRP36941 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LTBRP36941 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC13.92□□□□□ -0.18
LTBRP36941 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
LTBRP36941 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC13.92□□□□□ -0.18
LTBRP36941 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC13.92□□□□□ -0.18
LTBRP36941 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC13.92□□□□□ -0.18
LTBRP36941 RN7SL76P-201ENST00000482435 289 ntBASIC13.92□□□□□ -0.18
LTBRP36941 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LTBRP36941 AC104117.1-201ENST00000517817 900 ntBASIC13.92□□□□□ -0.18
LTBRP36941 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC13.92□□□□□ -0.18
LTBRP36941 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 AC079601.2-201ENST00000547729 775 ntBASIC13.92□□□□□ -0.18
LTBRP36941 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
LTBRP36941 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC13.92□□□□□ -0.18
LTBRP36941 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LTBRP36941 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC13.92□□□□□ -0.18
LTBRP36941 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
LTBRP36941 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 INTS4P1-203ENST00000641008 3683 ntBASIC13.92□□□□□ -0.18
LTBRP36941 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.92□□□□□ -0.18
LTBRP36941 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
LTBRP36941 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.92□□□□□ -0.18
LTBRP36941 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC13.92□□□□□ -0.18
LTBRP36941 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LTBRP36941 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 AL928654.5-201ENST00000624831 2501 ntBASIC13.92□□□□□ -0.18
LTBRP36941 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBRP36941 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.92□□□□□ -0.18
LTBRP36941 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.91□□□□□ -0.18
LTBRP36941 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.91□□□□□ -0.18
LTBRP36941 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.91□□□□□ -0.18
LTBRP36941 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 AC027601.5-201ENST00000624065 2482 ntBASIC13.91□□□□□ -0.18
LTBRP36941 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.91□□□□□ -0.18
LTBRP36941 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.91□□□□□ -0.18
LTBRP36941 LINC00552-201ENST00000625151 2579 ntBASIC13.91□□□□□ -0.18
LTBRP36941 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms