Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
XPAP23025 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
XPAP23025 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.07□□□□□ -0.16
XPAP23025 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
XPAP23025 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
XPAP23025 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
XPAP23025 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.07□□□□□ -0.16
XPAP23025 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
XPAP23025 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
XPAP23025 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
XPAP23025 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.06□□□□□ -0.16
XPAP23025 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC14.06□□□□□ -0.16
XPAP23025 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 KRT8P24-201ENST00000560290 1559 ntBASIC14.06□□□□□ -0.16
XPAP23025 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.06□□□□□ -0.16
XPAP23025 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.06□□□□□ -0.16
XPAP23025 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 AL354861.1-201ENST00000445213 355 ntBASIC14.06□□□□□ -0.16
XPAP23025 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.06□□□□□ -0.16
XPAP23025 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.06□□□□□ -0.16
XPAP23025 RNA5SP417-201ENST00000516459 108 ntBASIC14.06□□□□□ -0.16
XPAP23025 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
XPAP23025 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.06□□□□□ -0.16
XPAP23025 AC087045.2-201ENST00000606279 1003 ntBASIC14.06□□□□□ -0.16
XPAP23025 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.06□□□□□ -0.16
XPAP23025 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
XPAP23025 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
XPAP23025 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
XPAP23025 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.06□□□□□ -0.16
XPAP23025 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 AL928654.5-201ENST00000624831 2501 ntBASIC14.06□□□□□ -0.16
XPAP23025 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
XPAP23025 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
XPAP23025 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.06□□□□□ -0.16
XPAP23025 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
XPAP23025 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
XPAP23025 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
XPAP23025 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
XPAP23025 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.05□□□□□ -0.16
XPAP23025 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
XPAP23025 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
XPAP23025 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
XPAP23025 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
XPAP23025 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
XPAP23025 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
XPAP23025 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.05□□□□□ -0.16
XPAP23025 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
XPAP23025 MIR1307-201ENST00000408840 149 ntBASIC14.05□□□□□ -0.16
XPAP23025 HIST2H2BA-201ENST00000412169 381 ntBASIC14.05□□□□□ -0.16
XPAP23025 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
XPAP23025 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.05□□□□□ -0.16
XPAP23025 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14.05□□□□□ -0.16
XPAP23025 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.05□□□□□ -0.16
XPAP23025 MPRIPP1-201ENST00000452433 1089 ntBASIC14.05□□□□□ -0.16
XPAP23025 RN7SL8P-201ENST00000461771 266 ntBASIC14.05□□□□□ -0.16
XPAP23025 AC008267.1-201ENST00000474858 1069 ntBASIC14.05□□□□□ -0.16
XPAP23025 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.05□□□□□ -0.16
XPAP23025 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.05□□□□□ -0.16
XPAP23025 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.05□□□□□ -0.16
XPAP23025 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.05□□□□□ -0.16
XPAP23025 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.05□□□□□ -0.16
XPAP23025 KRT8P2-201ENST00000556193 944 ntBASIC14.05□□□□□ -0.16
XPAP23025 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC14.05□□□□□ -0.16
XPAP23025 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.05□□□□□ -0.16
XPAP23025 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.05□□□□□ -0.16
XPAP23025 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
XPAP23025 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.05□□□□□ -0.16
XPAP23025 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
XPAP23025 CR392039.2-201ENST00000623182 509 ntBASIC14.05□□□□□ -0.16
XPAP23025 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
XPAP23025 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
XPAP23025 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
XPAP23025 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.05□□□□□ -0.16
XPAP23025 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
XPAP23025 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.05□□□□□ -0.16
XPAP23025 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
XPAP23025 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
XPAP23025 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms