Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC22.7■■□□□ 1.22
CFTRP13569 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
CFTRP13569 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CFTRP13569 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
CFTRP13569 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC22.69■■□□□ 1.22
CFTRP13569 TPO-203ENST00000346956 2923 ntTSL 5 BASIC22.69■■□□□ 1.22
CFTRP13569 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CFTRP13569 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CFTRP13569 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CFTRP13569 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CFTRP13569 AC005549.1-201ENST00000579438 1629 ntBASIC22.69■■□□□ 1.22
CFTRP13569 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CFTRP13569 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CFTRP13569 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC22.69■■□□□ 1.22
CFTRP13569 DDX6P2-201ENST00000619520 1455 ntBASIC22.69■■□□□ 1.22
CFTRP13569 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CFTRP13569 MGST3-204ENST00000367888 778 ntTSL 3 BASIC22.69■■□□□ 1.22
CFTRP13569 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CFTRP13569 AL121949.1-201ENST00000402043 968 ntBASIC22.69■■□□□ 1.22
CFTRP13569 AL021407.3-201ENST00000407522 486 ntBASIC22.69■■□□□ 1.22
CFTRP13569 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC22.69■■□□□ 1.22
CFTRP13569 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC22.69■■□□□ 1.22
CFTRP13569 AL139353.1-202ENST00000547378 474 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
CFTRP13569 SALL1-204ENST00000566102 565 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CFTRP13569 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC22.69■■□□□ 1.22
CFTRP13569 AC091905.3-201ENST00000624959 234 ntBASIC22.69■■□□□ 1.22
CFTRP13569 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC22.69■■□□□ 1.22
CFTRP13569 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CFTRP13569 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC22.69■■□□□ 1.22
CFTRP13569 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CFTRP13569 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CFTRP13569 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CFTRP13569 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CFTRP13569 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CFTRP13569 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CFTRP13569 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC22.69■■□□□ 1.22
CFTRP13569 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CFTRP13569 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CFTRP13569 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CFTRP13569 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CFTRP13569 SULT1A3-202ENST00000395138 1326 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CFTRP13569 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CFTRP13569 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CFTRP13569 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC22.68■■□□□ 1.22
CFTRP13569 C2orf27AP2-201ENST00000438438 555 ntBASIC22.68■■□□□ 1.22
CFTRP13569 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CFTRP13569 RN7SL487P-201ENST00000468140 344 ntBASIC22.68■■□□□ 1.22
CFTRP13569 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC22.68■■□□□ 1.22
CFTRP13569 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC22.68■■□□□ 1.22
CFTRP13569 LINC02182-201ENST00000569362 498 ntTSL 2 BASIC22.68■■□□□ 1.22
CFTRP13569 MIR941-1-201ENST00000636396 72 ntBASIC22.68■■□□□ 1.22
CFTRP13569 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC22.68■■□□□ 1.22
CFTRP13569 MANEA-AS1-201ENST00000564541 2268 ntBASIC22.68■■□□□ 1.22
CFTRP13569 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC22.68■■□□□ 1.22
CFTRP13569 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CFTRP13569 TRNT1-202ENST00000280591 2180 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CFTRP13569 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC22.68■■□□□ 1.22
CFTRP13569 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CFTRP13569 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CFTRP13569 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CFTRP13569 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC22.68■■□□□ 1.22
CFTRP13569 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CFTRP13569 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CFTRP13569 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CFTRP13569 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CFTRP13569 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CFTRP13569 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CFTRP13569 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC22.68■■□□□ 1.22
CFTRP13569 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC22.67■■□□□ 1.22
CFTRP13569 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC22.67■■□□□ 1.22
CFTRP13569 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC22.67■■□□□ 1.22
CFTRP13569 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CFTRP13569 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CFTRP13569 AC008741.2-201ENST00000612792 3115 ntBASIC22.67■■□□□ 1.22
CFTRP13569 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CFTRP13569 TPI1P3-201ENST00000335020 740 ntBASIC22.67■■□□□ 1.22
CFTRP13569 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC22.67■■□□□ 1.22
CFTRP13569 RNF7-202ENST00000393000 805 ntTSL 2 BASIC22.67■■□□□ 1.22
CFTRP13569 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC22.67■■□□□ 1.22
CFTRP13569 OR2A1-AS1-203ENST00000468575 568 ntBASIC22.67■■□□□ 1.22
CFTRP13569 RN7SKP195-201ENST00000516587 303 ntBASIC22.67■■□□□ 1.22
CFTRP13569 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC22.67■■□□□ 1.22
CFTRP13569 SARS2-211ENST00000598831 665 ntTSL 5 BASIC22.67■■□□□ 1.22
CFTRP13569 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC22.67■■□□□ 1.22
CFTRP13569 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CFTRP13569 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CFTRP13569 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CFTRP13569 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC22.67■■□□□ 1.22
CFTRP13569 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CFTRP13569 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CFTRP13569 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC22.67■■□□□ 1.22
CFTRP13569 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CFTRP13569 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CFTRP13569 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CFTRP13569 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CFTRP13569 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CFTRP13569 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
CFTRP13569 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CFTRP13569 BEND3P1-201ENST00000421591 1944 ntBASIC22.67■■□□□ 1.22
CFTRP13569 POTEC-201ENST00000358970 1629 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms