Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 SOD2-202ENST00000367054 815 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 RN7SL277P-201ENST00000481521 288 ntBASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 AP002353.1-201ENST00000528257 1599 ntBASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 AC138701.2-201ENST00000553634 226 ntBASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 AC020658.4-201ENST00000613987 684 ntBASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 AL118556.2-201ENST00000614375 824 ntBASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 AC090386.2-201ENST00000623010 1039 ntBASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 AP000720.1-201ENST00000625091 483 ntBASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCNYL3P0C7X3 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 AC011498.7-201ENST00000624986 2027 ntBASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 AC073869.2-201ENST00000417338 1026 ntBASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms