Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
POLR3DP05423 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
POLR3DP05423 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
POLR3DP05423 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.62■□□□□ 0.25
POLR3DP05423 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
POLR3DP05423 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
POLR3DP05423 AC061965.1-201ENST00000560524 1465 ntBASIC16.61■□□□□ 0.25
POLR3DP05423 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.61■□□□□ 0.25
POLR3DP05423 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR3DP05423 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
POLR3DP05423 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR3DP05423 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR3DP05423 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
POLR3DP05423 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
POLR3DP05423 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR3DP05423 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
POLR3DP05423 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
POLR3DP05423 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 STK24P1-201ENST00000455035 1291 ntBASIC16.61■□□□□ 0.25
POLR3DP05423 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
POLR3DP05423 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR3DP05423 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR3DP05423 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.61■□□□□ 0.25
POLR3DP05423 AL009176.1-201ENST00000607876 650 ntBASIC16.61■□□□□ 0.25
POLR3DP05423 AC002044.2-201ENST00000624910 970 ntBASIC16.61■□□□□ 0.25
POLR3DP05423 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
POLR3DP05423 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC16.61■□□□□ 0.25
POLR3DP05423 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
POLR3DP05423 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.61■□□□□ 0.25
POLR3DP05423 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR3DP05423 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
POLR3DP05423 GOLGA8UP-201ENST00000527159 1755 ntBASIC16.61■□□□□ 0.25
POLR3DP05423 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
POLR3DP05423 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 AC015909.5-201ENST00000624336 2266 ntBASIC16.61■□□□□ 0.25
POLR3DP05423 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR3DP05423 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC16.6■□□□□ 0.25
POLR3DP05423 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
POLR3DP05423 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
POLR3DP05423 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 BAK1P1-201ENST00000317045 636 ntBASIC16.6■□□□□ 0.25
POLR3DP05423 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
POLR3DP05423 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR3DP05423 CD81-209ENST00000492627 886 ntTSL 3 BASIC16.6■□□□□ 0.25
POLR3DP05423 COQ10BP2-201ENST00000513804 724 ntBASIC16.6■□□□□ 0.25
POLR3DP05423 IGHV1-12-201ENST00000518307 205 ntBASIC16.6■□□□□ 0.25
POLR3DP05423 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
POLR3DP05423 AC226150.1-201ENST00000544259 466 ntBASIC16.6■□□□□ 0.25
POLR3DP05423 VENTXP3-201ENST00000546480 773 ntBASIC16.6■□□□□ 0.25
POLR3DP05423 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.6■□□□□ 0.25
POLR3DP05423 AL132994.1-201ENST00000554098 400 ntBASIC16.6■□□□□ 0.25
POLR3DP05423 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR3DP05423 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.6■□□□□ 0.25
POLR3DP05423 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR3DP05423 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
POLR3DP05423 AC005014.1-201ENST00000432006 2976 ntBASIC16.6■□□□□ 0.25
POLR3DP05423 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC16.6■□□□□ 0.25
POLR3DP05423 STK3-218ENST00000617590 2485 ntTSL 5 BASIC16.6■□□□□ 0.25
POLR3DP05423 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC16.6■□□□□ 0.25
POLR3DP05423 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR3DP05423 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
POLR3DP05423 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms