Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 ARHGAP36-203ENST00000370922 2736 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 ACSBG2-202ENST00000586696 2739 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
APOC3P02656 DNMT3B-201ENST00000201963 4255 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 RAB7B-201ENST00000617070 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 RCC2P1-201ENST00000452257 1476 ntBASIC11.06□□□□□ -0.64
APOC3P02656 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
APOC3P02656 AMBRA1-201ENST00000314845 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 BEAN1-207ENST00000564819 2929 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 LINC00894-206ENST00000450989 2361 ntTSL 2 BASIC11.05□□□□□ -0.64
APOC3P02656 RFX5-215ENST00000452671 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 AC093583.1-201ENST00000462083 2383 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 SRRT-215ENST00000614484 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
APOC3P02656 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 CTLA4-202ENST00000302823 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 LRRC8A-202ENST00000372599 4161 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 TNFSF13B-201ENST00000375887 2582 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 TTC30A-201ENST00000355689 5975 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
APOC3P02656 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
APOC3P02656 ARMC8-201ENST00000358441 3181 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 JMJD7-PLA2G4B-202ENST00000382448 3331 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
APOC3P02656 KDM8-201ENST00000286096 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC11.05□□□□□ -0.64
APOC3P02656 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC11.05□□□□□ -0.64
APOC3P02656 MTMR2-202ENST00000352297 3350 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 RPF1-202ENST00000370656 724 ntTSL 2 BASIC11.05□□□□□ -0.64
APOC3P02656 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 ARSEP1-201ENST00000420443 635 ntBASIC11.05□□□□□ -0.64
APOC3P02656 AC015922.1-201ENST00000421102 1152 ntBASIC11.05□□□□□ -0.64
APOC3P02656 AC142381.1-201ENST00000426099 345 ntBASIC11.05□□□□□ -0.64
APOC3P02656 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC11.05□□□□□ -0.64
APOC3P02656 FLT4-206ENST00000502649 4140 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.05□□□□□ -0.64
APOC3P02656 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
APOC3P02656 TSPAN9-206ENST00000537971 4284 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
APOC3P02656 MIR4651-201ENST00000582622 73 ntBASIC11.05□□□□□ -0.64
APOC3P02656 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.05□□□□□ -0.64
APOC3P02656 PCDHGB5-201ENST00000617380 4578 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC11.05□□□□□ -0.64
APOC3P02656 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.05□□□□□ -0.64
APOC3P02656 SPRY4-201ENST00000344120 4938 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 GRHL3-203ENST00000356046 2804 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 FYCO1-201ENST00000296137 8504 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 ROR2-201ENST00000375708 4096 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC11.05□□□□□ -0.64
APOC3P02656 PLEKHG3-204ENST00000484731 3001 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 RHD-210ENST00000622561 3007 ntTSL 5 BASIC11.05□□□□□ -0.64
APOC3P02656 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 AC093330.2-201ENST00000624814 3998 ntBASIC11.05□□□□□ -0.64
APOC3P02656 RDH16-202ENST00000398138 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC3P02656 LINC00365-201ENST00000413591 2618 ntTSL 3 BASIC11.05□□□□□ -0.64
APOC3P02656 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOC3P02656 SERP1-203ENST00000479209 3934 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
APOC3P02656 ZNF766-202ENST00000593612 2331 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
APOC3P02656 PELI1-201ENST00000358912 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC3P02656 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOC3P02656 ZNF300-205ENST00000446148 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC3P02656 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOC3P02656 USP31-201ENST00000219689 10699 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC3P02656 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC3P02656 C3orf35-201ENST00000328376 1859 ntAPPRIS P5 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC3P02656 ZNF423-205ENST00000562871 4514 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
APOC3P02656 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC11.04□□□□□ -0.64
APOC3P02656 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC11.04□□□□□ -0.64
APOC3P02656 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC3P02656 MVK-213ENST00000625889 2591 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOC3P02656 DDA1-201ENST00000359866 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC3P02656 C2-211ENST00000469372 1906 ntTSL 2 BASIC11.04□□□□□ -0.64
APOC3P02656 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC3P02656 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
APOC3P02656 C19orf47-208ENST00000582783 3628 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC3P02656 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
APOC3P02656 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
APOC3P02656 YBX2P1-201ENST00000394192 760 ntBASIC11.04□□□□□ -0.64
APOC3P02656 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC3P02656 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOC3P02656 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC11.04□□□□□ -0.64
APOC3P02656 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.04□□□□□ -0.64
APOC3P02656 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOC3P02656 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
APOC3P02656 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOC3P02656 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
APOC3P02656 AP000867.3-201ENST00000524675 377 ntBASIC11.04□□□□□ -0.64
APOC3P02656 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.04□□□□□ -0.64
APOC3P02656 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.04□□□□□ -0.64
APOC3P02656 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC11.04□□□□□ -0.64
APOC3P02656 FICD-205ENST00000552758 603 ntTSL 2 BASIC11.04□□□□□ -0.64
APOC3P02656 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.04□□□□□ -0.64
APOC3P02656 AC034105.1-201ENST00000563488 319 ntBASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms