RNA–Protein interactions for RNA: ENST00000537971.5

TSPAN9-206, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPAN9, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-206ENST00000537971 NISCHQ9Y2I1 1504 aa26.4■■□□□ 1.82
TSPAN9-206ENST00000537971 DCAF8L2P0C7V8 631 aa23.86■■□□□ 1.41
TSPAN9-206ENST00000537971 ABCC9O60706 1549 aa23.42■■□□□ 1.34
TSPAN9-206ENST00000537971 CCDC180Q9P1Z9 1646 aa23.09■■□□□ 1.29
TSPAN9-206ENST00000537971 RB1CC1Q8TDY2 1594 aa22.28■■□□□ 1.16
TSPAN9-206ENST00000537971 PABPN1Q86U42 306 aaKnown RBP eCLIP22.23■■□□□ 1.15
TSPAN9-206ENST00000537971 NACADO15069 1562 aa22.11■■□□□ 1.13
TSPAN9-206ENST00000537971 SHROOM4Q9ULL8 1493 aa21.9■■□□□ 1.1
TSPAN9-206ENST00000537971 ZCCHC6Q5VYS8 1495 aaKnown RBP21.84■■□□□ 1.09
TSPAN9-206ENST00000537971 MYO15BQ96JP2 1530 aa21.63■■□□□ 1.05
TSPAN9-206ENST00000537971 DCAF1Q9Y4B6 1507 aa21.58■■□□□ 1.04
TSPAN9-206ENST00000537971 SCRIBQ14160 1630 aa21.58■■□□□ 1.04
TSPAN9-206ENST00000537971 SUPT5HO00267 1087 aaKnown RBP21.07■□□□□ 0.96
TSPAN9-206ENST00000537971 DNAJC5BQ9UF47 199 aa21.02■□□□□ 0.96
TSPAN9-206ENST00000537971 CECR2Q9BXF3 1484 aa21■□□□□ 0.95
TSPAN9-206ENST00000537971 BICRAQ9NZM4 1560 aa20.82■□□□□ 0.92
TSPAN9-206ENST00000537971 EIF4G1Q04637 1599 aaKnown RBP20.76■□□□□ 0.91
TSPAN9-206ENST00000537971 BAZ1BQ9UIG0 1483 aaKnown RBP20.67■□□□□ 0.9
TSPAN9-206ENST00000537971 BAZ1AQ9NRL2 1556 aaPredicted RBP20.66■□□□□ 0.9
TSPAN9-206ENST00000537971 CC2D2AQ9P2K1 1620 aa20.65■□□□□ 0.9
TSPAN9-206ENST00000537971 UNC13AQ9UPW8 1703 aa20.65■□□□□ 0.9
TSPAN9-206ENST00000537971 ERCC6Q03468 1493 aa20.64■□□□□ 0.9
TSPAN9-206ENST00000537971 SMARCA2P51531 1590 aa20.6■□□□□ 0.89
TSPAN9-206ENST00000537971 ATAD2BQ9ULI0 1458 aa20.45■□□□□ 0.86
TSPAN9-206ENST00000537971 NCAPD3P42695 1498 aa20.4■□□□□ 0.86
TSPAN9-206ENST00000537971 SMARCA4P51532 1647 aa20.35■□□□□ 0.85
TSPAN9-206ENST00000537971 PDS5BQ9NTI5 1447 aa20.33■□□□□ 0.85
TSPAN9-206ENST00000537971 MROH2BQ7Z745 1585 aa20.29■□□□□ 0.84
TSPAN9-206ENST00000537971 RSF1Q96T23 1441 aaPredicted RBP20.28■□□□□ 0.84
TSPAN9-206ENST00000537971 CADPSQ9ULU8 1353 aa20.17■□□□□ 0.82
TSPAN9-206ENST00000537971 HMGXB3Q12766 1538 aa20.14■□□□□ 0.81
TSPAN9-206ENST00000537971 FAM9AQ8IZU1 332 aaPredicted RBP20.12■□□□□ 0.81
TSPAN9-206ENST00000537971 FBLN2P98095 1184 aa20.1■□□□□ 0.81
TSPAN9-206ENST00000537971 WIZO95785 1651 aa19.97■□□□□ 0.79
TSPAN9-206ENST00000537971 CEP164Q9UPV0 1460 aa19.96■□□□□ 0.79
TSPAN9-206ENST00000537971 TOP2AP11388 1531 aaKnown RBP19.95■□□□□ 0.78
TSPAN9-206ENST00000537971 NESP48681 1621 aa19.9■□□□□ 0.78
TSPAN9-206ENST00000537971 TRIM41Q8WV44 630 aa19.89■□□□□ 0.77
TSPAN9-206ENST00000537971 FANCD2Q9BXW9 1451 aa19.87■□□□□ 0.77
TSPAN9-206ENST00000537971 LAMC3Q9Y6N6 1575 aa19.84■□□□□ 0.77
TSPAN9-206ENST00000537971 CCDC88BA6NC98 1476 aa19.83■□□□□ 0.76
TSPAN9-206ENST00000537971 PEG3Q9GZU2 1588 aa19.81■□□□□ 0.76
TSPAN9-206ENST00000537971 CHMP7Q8WUX9 453 aaPredicted RBP19.8■□□□□ 0.76
TSPAN9-206ENST00000537971 MRC2Q9UBG0 1479 aa19.77■□□□□ 0.75
TSPAN9-206ENST00000537971 CUX2O14529 1486 aa19.74■□□□□ 0.75
TSPAN9-206ENST00000537971 ABCC8Q09428 1581 aa19.72■□□□□ 0.75
TSPAN9-206ENST00000537971 CFTRP13569 1480 aa19.69■□□□□ 0.74
TSPAN9-206ENST00000537971 OSCARQ8IYS5 282 aa19.69■□□□□ 0.74
TSPAN9-206ENST00000537971 TTBK1Q5TCY1 1321 aaPredicted RBP19.6■□□□□ 0.73
TSPAN9-206ENST00000537971 SOGA1O94964 1423 aa19.57■□□□□ 0.72
TSPAN9-206ENST00000537971 EHMT2Q96KQ7 1210 aa19.56■□□□□ 0.72
TSPAN9-206ENST00000537971 WRNQ14191 1432 aaPredicted RBP eCLIP19.52■□□□□ 0.71
TSPAN9-206ENST00000537971 NPM1P06748 294 aaKnown RBP eCLIP19.5■□□□□ 0.71
TSPAN9-206ENST00000537971 TDRD9Q8NDG6 1382 aaKnown RBP19.48■□□□□ 0.71
TSPAN9-206ENST00000537971 RANGAP1P46060 587 aaPredicted RBP19.48■□□□□ 0.71
TSPAN9-206ENST00000537971 IFT140Q96RY7 1462 aa19.46■□□□□ 0.71
TSPAN9-206ENST00000537971 UBTFP17480 764 aaKnown RBP19.44■□□□□ 0.7
TSPAN9-206ENST00000537971 TRHP20396 242 aaPredicted RBP19.37■□□□□ 0.69
TSPAN9-206ENST00000537971 DNAJC5Q9H3Z4 198 aa19.36■□□□□ 0.69
TSPAN9-206ENST00000537971 ATP1B4Q9UN42 357 aaPredicted RBP19.36■□□□□ 0.69
TSPAN9-206ENST00000537971 TOPBP1Q92547 1522 aa19.35■□□□□ 0.69
TSPAN9-206ENST00000537971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.35■□□□□ 0.69
TSPAN9-206ENST00000537971 HNRNPUL2Q1KMD3 747 aaKnown RBP19.35■□□□□ 0.69
TSPAN9-206ENST00000537971 KIF27Q86VH2 1401 aa19.3■□□□□ 0.68
TSPAN9-206ENST00000537971 CYB5RLQ6IPT4 315 aa19.28■□□□□ 0.68
TSPAN9-206ENST00000537971 FGD5Q6ZNL6 1462 aa19.28■□□□□ 0.68
TSPAN9-206ENST00000537971 DNMBPQ6XZF7 1577 aa19.28■□□□□ 0.68
TSPAN9-206ENST00000537971 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.682e-6■■■■■ 30.1
TSPAN9-206ENST00000537971 URB2Q14146 1524 aaKnown RBP19.27■□□□□ 0.68
TSPAN9-206ENST00000537971 KIF21AQ7Z4S6 1674 aa19.27■□□□□ 0.68
TSPAN9-206ENST00000537971 RAD54L2Q9Y4B4 1467 aa19.24■□□□□ 0.67
TSPAN9-206ENST00000537971 WDR62O43379 1518 aa19.24■□□□□ 0.67
TSPAN9-206ENST00000537971 GAPVD1Q14C86 1478 aa19.2■□□□□ 0.66
TSPAN9-206ENST00000537971 POLA1P09884 1462 aaPredicted RBP19.19■□□□□ 0.66
TSPAN9-206ENST00000537971 GRIN2BQ13224 1484 aa19.19■□□□□ 0.66
TSPAN9-206ENST00000537971 APLP2Q06481 763 aa19.17■□□□□ 0.66
TSPAN9-206ENST00000537971 CSRNP3Q8WYN3 585 aa19.16■□□□□ 0.66
TSPAN9-206ENST00000537971 THOC2Q8NI27 1593 aaKnown RBP19.1■□□□□ 0.65
TSPAN9-206ENST00000537971 CHIC1Q5VXU3 224 aa19.08■□□□□ 0.65
TSPAN9-206ENST00000537971 CARMIL1Q5VZK9 1371 aa19.07■□□□□ 0.64
TSPAN9-206ENST00000537971 ZNF608Q9ULD9 1512 aaPredicted RBP19.07■□□□□ 0.64
TSPAN9-206ENST00000537971 JPH4Q96JJ6 628 aa19.04■□□□□ 0.64
TSPAN9-206ENST00000537971 SNAPC4Q5SXM2 1469 aa19.04■□□□□ 0.64
TSPAN9-206ENST00000537971 CUX1P39880 1505 aa19.03■□□□□ 0.64
TSPAN9-206ENST00000537971 CARMIL2Q6F5E8 1435 aa19.01■□□□□ 0.63
TSPAN9-206ENST00000537971 MYT1LQ9UL68 1186 aa19.01■□□□□ 0.63
TSPAN9-206ENST00000537971 P3H3Q8IVL6 736 aa19.01■□□□□ 0.63
TSPAN9-206ENST00000537971 FHAD1B1AJZ9 1412 aa19■□□□□ 0.63
TSPAN9-206ENST00000537971 MAGI1Q96QZ7 1491 aaPredicted RBP18.99■□□□□ 0.63
TSPAN9-206ENST00000537971 PCGF6Q9BYE7 350 aa18.95■□□□□ 0.62
TSPAN9-206ENST00000537971 SYNJ2O15056 1496 aa18.94■□□□□ 0.62
TSPAN9-206ENST00000537971 ABCA10Q8WWZ4 1543 aa18.93■□□□□ 0.62
TSPAN9-206ENST00000537971 EEA1Q15075 1411 aa18.92■□□□□ 0.62
TSPAN9-206ENST00000537971 ARID3CA6NKF2 412 aa18.91■□□□□ 0.62
TSPAN9-206ENST00000537971 CDK11AQ9UQ88 783 aaPredicted RBP18.9■□□□□ 0.62
TSPAN9-206ENST00000537971 PRDM2Q13029 1718 aa18.9■□□□□ 0.62
TSPAN9-206ENST00000537971 SYNJ1O43426 1573 aa18.89■□□□□ 0.61
TSPAN9-206ENST00000537971 TOP2BQ02880 1626 aa18.86■□□□□ 0.61
TSPAN9-206ENST00000537971 EIF4G3O43432 1585 aaKnown RBP18.82■□□□□ 0.6
TSPAN9-206ENST00000537971 IGF1RP08069 1367 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms