RNA–Protein interactions for RNA: ENST00000582783.5

C19orf47-208, Transcript of chromosome 19 open reading frame 47, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene C19orf47, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-208ENST00000582783 NISCHQ9Y2I1 1504 aa25.2■■□□□ 1.62
C19orf47-208ENST00000582783 DCAF8L2P0C7V8 631 aa22.84■■□□□ 1.25
C19orf47-208ENST00000582783 SHROOM4Q9ULL8 1493 aa22.65■■□□□ 1.22
C19orf47-208ENST00000582783 SUPT5HO00267 1087 aaKnown RBP22.23■■□□□ 1.15
C19orf47-208ENST00000582783 ZCCHC6Q5VYS8 1495 aaKnown RBP21.1■□□□□ 0.97
C19orf47-208ENST00000582783 EHMT2Q96KQ7 1210 aa21.05■□□□□ 0.96
C19orf47-208ENST00000582783 CCDC180Q9P1Z9 1646 aa21■□□□□ 0.95
C19orf47-208ENST00000582783 ABCC9O60706 1549 aa20.97■□□□□ 0.95
C19orf47-208ENST00000582783 FAM9AQ8IZU1 332 aaPredicted RBP20.77■□□□□ 0.92
C19orf47-208ENST00000582783 CHIC1Q5VXU3 224 aa20.77■□□□□ 0.91
C19orf47-208ENST00000582783 LOC105371045A0A1W2PR82 267 aa20.59■□□□□ 0.89
C19orf47-208ENST00000582783 SCRIBQ14160 1630 aa20.54■□□□□ 0.88
C19orf47-208ENST00000582783 PCGF6Q9BYE7 350 aa20.45■□□□□ 0.86
C19orf47-208ENST00000582783 TRIM41Q8WV44 630 aa20.42■□□□□ 0.86
C19orf47-208ENST00000582783 PABPN1Q86U42 306 aaKnown RBP eCLIP20.4■□□□□ 0.86
C19orf47-208ENST00000582783 MYO15BQ96JP2 1530 aa20.31■□□□□ 0.84
C19orf47-208ENST00000582783 TTBK1Q5TCY1 1321 aaPredicted RBP20.22■□□□□ 0.83
C19orf47-208ENST00000582783 PPARGC1BQ86YN6 1023 aaKnown RBP20.19■□□□□ 0.82
C19orf47-208ENST00000582783 DCAF1Q9Y4B6 1507 aa20.11■□□□□ 0.81
C19orf47-208ENST00000582783 RSF1Q96T23 1441 aaPredicted RBP20.06■□□□□ 0.8
C19orf47-208ENST00000582783 CECR2Q9BXF3 1484 aa20.03■□□□□ 0.8
C19orf47-208ENST00000582783 RANGAP1P46060 587 aaPredicted RBP19.99■□□□□ 0.79
C19orf47-208ENST00000582783 NACADO15069 1562 aa19.82■□□□□ 0.76
C19orf47-208ENST00000582783 RB1CC1Q8TDY2 1594 aa19.78■□□□□ 0.76
C19orf47-208ENST00000582783 HRCP23327 699 aa19.76■□□□□ 0.75
C19orf47-208ENST00000582783 MROH2BQ7Z745 1585 aa19.76■□□□□ 0.75
C19orf47-208ENST00000582783 UBTFP17480 764 aaKnown RBP19.75■□□□□ 0.75
C19orf47-208ENST00000582783 TRIM26Q12899 539 aaPredicted RBP19.64■□□□□ 0.73
C19orf47-208ENST00000582783 WIZO95785 1651 aa19.6■□□□□ 0.73
C19orf47-208ENST00000582783 BAZ1AQ9NRL2 1556 aaPredicted RBP19.39■□□□□ 0.69
C19orf47-208ENST00000582783 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.36■□□□□ 0.69
C19orf47-208ENST00000582783 CCER1Q8TC90 406 aaPredicted RBP19.36■□□□□ 0.69
C19orf47-208ENST00000582783 ABCC8Q09428 1581 aa19.35■□□□□ 0.69
C19orf47-208ENST00000582783 APLP2Q06481 763 aa19.32■□□□□ 0.68
C19orf47-208ENST00000582783 CCDC88BA6NC98 1476 aa19.31■□□□□ 0.68
C19orf47-208ENST00000582783 CSRNP3Q8WYN3 585 aa19.28■□□□□ 0.68
C19orf47-208ENST00000582783 ATP1B4Q9UN42 357 aaPredicted RBP19.23■□□□□ 0.67
C19orf47-208ENST00000582783 HNRNPUL2Q1KMD3 747 aaKnown RBP19.22■□□□□ 0.67
C19orf47-208ENST00000582783 SOGA1O94964 1423 aa19.22■□□□□ 0.67
C19orf47-208ENST00000582783 SMARCA4P51532 1647 aa19.17■□□□□ 0.66
C19orf47-208ENST00000582783 BAZ1BQ9UIG0 1483 aaKnown RBP19.11■□□□□ 0.65
C19orf47-208ENST00000582783 TOP2AP11388 1531 aaKnown RBP19.08■□□□□ 0.65
C19orf47-208ENST00000582783 RUSC2Q8N2Y8 1516 aa19.08■□□□□ 0.64
C19orf47-208ENST00000582783 ITGAEP38570 1179 aa19.08■□□□□ 0.64
C19orf47-208ENST00000582783 WRNQ14191 1432 aaPredicted RBP eCLIP19.05■□□□□ 0.64
C19orf47-208ENST00000582783 ZEB1P37275 1124 aaPredicted RBP19.02■□□□□ 0.63
C19orf47-208ENST00000582783 UNC13AQ9UPW8 1703 aa19.01■□□□□ 0.63
C19orf47-208ENST00000582783 SMARCA2P51531 1590 aa19■□□□□ 0.63
C19orf47-208ENST00000582783 BICRAQ9NZM4 1560 aa18.97■□□□□ 0.63
C19orf47-208ENST00000582783 CEP162Q5TB80 1403 aa18.96■□□□□ 0.63
C19orf47-208ENST00000582783 ATAD2BQ9ULI0 1458 aa18.96■□□□□ 0.63
C19orf47-208ENST00000582783 P3H3Q8IVL6 736 aa18.96■□□□□ 0.63
C19orf47-208ENST00000582783 CLIP1P30622 1438 aa18.77■□□□□ 0.6
C19orf47-208ENST00000582783 TNIKQ9UKE5 1360 aa18.76■□□□□ 0.59
C19orf47-208ENST00000582783 GOLGA3Q08378 1498 aa18.76■□□□□ 0.59
C19orf47-208ENST00000582783 YTHDC1Q96MU7 727 aaKnown RBP18.73■□□□□ 0.59
C19orf47-208ENST00000582783 ARID3CA6NKF2 412 aa18.71■□□□□ 0.59
C19orf47-208ENST00000582783 RAPGEF2Q9Y4G8 1499 aa18.66■□□□□ 0.58
C19orf47-208ENST00000582783 EEA1Q15075 1411 aa18.65■□□□□ 0.58
C19orf47-208ENST00000582783 SCAF1Q9H7N4 1312 aaKnown RBP18.65■□□□□ 0.58
C19orf47-208ENST00000582783 SYNJ1O43426 1573 aa18.65■□□□□ 0.58
C19orf47-208ENST00000582783 FAM50AQ14320 339 aaKnown RBP18.63■□□□□ 0.57
C19orf47-208ENST00000582783 CEP164Q9UPV0 1460 aa18.63■□□□□ 0.57
C19orf47-208ENST00000582783 EIF4G1Q04637 1599 aaKnown RBP18.62■□□□□ 0.57
C19orf47-208ENST00000582783 DNAJC5BQ9UF47 199 aa18.61■□□□□ 0.57
C19orf47-208ENST00000582783 DIEXFQ68CQ4 756 aaKnown RBP18.57■□□□□ 0.56
C19orf47-208ENST00000582783 KANK4Q5T7N3 995 aaPredicted RBP18.55■□□□□ 0.56
C19orf47-208ENST00000582783 CUX2O14529 1486 aa18.53■□□□□ 0.56
C19orf47-208ENST00000582783 KIF27Q86VH2 1401 aa18.52■□□□□ 0.56
C19orf47-208ENST00000582783 FBLN2P98095 1184 aa18.49■□□□□ 0.55
C19orf47-208ENST00000582783 NCAPD3P42695 1498 aa18.46■□□□□ 0.55
C19orf47-208ENST00000582783 NEUROD1Q13562 356 aa18.45■□□□□ 0.54
C19orf47-208ENST00000582783 CADPSQ9ULU8 1353 aa18.44■□□□□ 0.54
C19orf47-208ENST00000582783 VPS8Q8N3P4 1428 aa18.4■□□□□ 0.54
C19orf47-208ENST00000582783 NESP48681 1621 aa18.39■□□□□ 0.54
C19orf47-208ENST00000582783 TDRD9Q8NDG6 1382 aaKnown RBP18.38■□□□□ 0.53
C19orf47-208ENST00000582783 CARMIL1Q5VZK9 1371 aa18.38■□□□□ 0.53
C19orf47-208ENST00000582783 PEG3Q9GZU2 1588 aa18.37■□□□□ 0.53
C19orf47-208ENST00000582783 PELP1Q8IZL8 1130 aaKnown RBP18.36■□□□□ 0.53
C19orf47-208ENST00000582783 CUX1P39880 1505 aa18.35■□□□□ 0.53
C19orf47-208ENST00000582783 ZNF316A6NFI3 1004 aaPredicted RBP18.34■□□□□ 0.53
C19orf47-208ENST00000582783 RAD54L2Q9Y4B4 1467 aa18.32■□□□□ 0.52
C19orf47-208ENST00000582783 CC2D2AQ9P2K1 1620 aa18.31■□□□□ 0.52
C19orf47-208ENST00000582783 CFTRP13569 1480 aa18.3■□□□□ 0.52
C19orf47-208ENST00000582783 GTF3C3Q9Y5Q9 886 aa18.29■□□□□ 0.52
C19orf47-208ENST00000582783 FANCD2Q9BXW9 1451 aa18.28■□□□□ 0.52
C19orf47-208ENST00000582783 FGD5Q6ZNL6 1462 aa18.27■□□□□ 0.52
C19orf47-208ENST00000582783 CENPBP07199 599 aaPredicted RBP18.26■□□□□ 0.51
C19orf47-208ENST00000582783 IGF1RP08069 1367 aa18.26■□□□□ 0.51
C19orf47-208ENST00000582783 TOP2BQ02880 1626 aa18.25■□□□□ 0.51
C19orf47-208ENST00000582783 CHIC2Q9UKJ5 165 aa18.24■□□□□ 0.51
C19orf47-208ENST00000582783 HIRIP3Q9BW71 556 aaPredicted RBP18.23■□□□□ 0.51
C19orf47-208ENST00000582783 KIF21BO75037 1637 aa18.22■□□□□ 0.51
C19orf47-208ENST00000582783 HMGXB3Q12766 1538 aa18.22■□□□□ 0.51
C19orf47-208ENST00000582783 ACIN1Q9UKV3 1341 aaKnown RBP18.22■□□□□ 0.51
C19orf47-208ENST00000582783 ARAP1Q96P48 1450 aa18.19■□□□□ 0.5
C19orf47-208ENST00000582783 CNGB1Q14028 1251 aaPredicted RBP18.19■□□□□ 0.5
C19orf47-208ENST00000582783 FHOD3Q2V2M9 1422 aa18.18■□□□□ 0.5
C19orf47-208ENST00000582783 TRIM52Q96A61 297 aa18.17■□□□□ 0.5
C19orf47-208ENST00000582783 MIER1Q8N108 512 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms