RNA–Protein interactions for RNA: ENST00000372599.7

LRRC8A-202, Transcript of leucine rich repeat containing 8 VRAC subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC8A, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC8A-202ENST00000372599 NISCHQ9Y2I1 1504 aa23.1■■□□□ 1.29
LRRC8A-202ENST00000372599 DCAF8L2P0C7V8 631 aa21.92■■□□□ 1.1
LRRC8A-202ENST00000372599 SHROOM4Q9ULL8 1493 aa21.09■□□□□ 0.97
LRRC8A-202ENST00000372599 SUPT5HO00267 1087 aaKnown RBP20.98■□□□□ 0.95
LRRC8A-202ENST00000372599 ABCC9O60706 1549 aa20.2■□□□□ 0.82
LRRC8A-202ENST00000372599 CCDC180Q9P1Z9 1646 aa20.08■□□□□ 0.8
LRRC8A-202ENST00000372599 EHMT2Q96KQ7 1210 aa19.91■□□□□ 0.78
LRRC8A-202ENST00000372599 FAM9AQ8IZU1 332 aaPredicted RBP19.66■□□□□ 0.74
LRRC8A-202ENST00000372599 PCGF6Q9BYE7 350 aa19.46■□□□□ 0.71
LRRC8A-202ENST00000372599 TRIM41Q8WV44 630 aa19.41■□□□□ 0.7
LRRC8A-202ENST00000372599 CHIC1Q5VXU3 224 aa19.24■□□□□ 0.67
LRRC8A-202ENST00000372599 ZCCHC6Q5VYS8 1495 aaKnown RBP19.23■□□□□ 0.67
LRRC8A-202ENST00000372599 PABPN1Q86U42 306 aaKnown RBP eCLIP19.15■□□□□ 0.66
LRRC8A-202ENST00000372599 TTBK1Q5TCY1 1321 aaPredicted RBP19.15■□□□□ 0.66
LRRC8A-202ENST00000372599 RANGAP1P46060 587 aaPredicted RBP19.06■□□□□ 0.64
LRRC8A-202ENST00000372599 LOC105371045A0A1W2PR82 267 aa19.06■□□□□ 0.64
LRRC8A-202ENST00000372599 RB1CC1Q8TDY2 1594 aa19.01■□□□□ 0.63
LRRC8A-202ENST00000372599 NACADO15069 1562 aa18.96■□□□□ 0.63
LRRC8A-202ENST00000372599 APLP2Q06481 763 aa18.96■□□□□ 0.63
LRRC8A-202ENST00000372599 UBTFP17480 764 aaKnown RBP18.93■□□□□ 0.62
LRRC8A-202ENST00000372599 SCRIBQ14160 1630 aa18.9■□□□□ 0.62
LRRC8A-202ENST00000372599 PPARGC1BQ86YN6 1023 aaKnown RBP18.87■□□□□ 0.61
LRRC8A-202ENST00000372599 DCAF1Q9Y4B6 1507 aa18.76■□□□□ 0.59
LRRC8A-202ENST00000372599 HRCP23327 699 aa18.73■□□□□ 0.59
LRRC8A-202ENST00000372599 UNC13AQ9UPW8 1703 aa18.71■□□□□ 0.59
LRRC8A-202ENST00000372599 TRIM26Q12899 539 aaPredicted RBP18.69■□□□□ 0.58
LRRC8A-202ENST00000372599 MYO15BQ96JP2 1530 aa18.68■□□□□ 0.58
LRRC8A-202ENST00000372599 CCER1Q8TC90 406 aaPredicted RBP18.67■□□□□ 0.58
LRRC8A-202ENST00000372599 ATP1B4Q9UN42 357 aaPredicted RBP18.62■□□□□ 0.57
LRRC8A-202ENST00000372599 ZEB1P37275 1124 aaPredicted RBP18.61■□□□□ 0.57
LRRC8A-202ENST00000372599 BICRAQ9NZM4 1560 aa18.6■□□□□ 0.57
LRRC8A-202ENST00000372599 DNAJC5BQ9UF47 199 aa18.59■□□□□ 0.57
LRRC8A-202ENST00000372599 RSF1Q96T23 1441 aaPredicted RBP18.36■□□□□ 0.53
LRRC8A-202ENST00000372599 CECR2Q9BXF3 1484 aa18.29■□□□□ 0.52
LRRC8A-202ENST00000372599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.24■□□□□ 0.51
LRRC8A-202ENST00000372599 HNRNPUL2Q1KMD3 747 aaKnown RBP18.23■□□□□ 0.51
LRRC8A-202ENST00000372599 ITGAEP38570 1179 aa18.21■□□□□ 0.51
LRRC8A-202ENST00000372599 CSRNP3Q8WYN3 585 aa18.17■□□□□ 0.5
LRRC8A-202ENST00000372599 CENPBP07199 599 aaPredicted RBP18.17■□□□□ 0.5
LRRC8A-202ENST00000372599 YTHDC1Q96MU7 727 aaKnown RBP18.13■□□□□ 0.49
LRRC8A-202ENST00000372599 EIF4G1Q04637 1599 aaKnown RBP18.1■□□□□ 0.49
LRRC8A-202ENST00000372599 CC2D2AQ9P2K1 1620 aa18.03■□□□□ 0.48
LRRC8A-202ENST00000372599 MROH2BQ7Z745 1585 aa18■□□□□ 0.47
LRRC8A-202ENST00000372599 PELP1Q8IZL8 1130 aaKnown RBP17.94■□□□□ 0.46
LRRC8A-202ENST00000372599 BAZ1AQ9NRL2 1556 aaPredicted RBP17.91■□□□□ 0.46
LRRC8A-202ENST00000372599 P3H3Q8IVL6 736 aa17.91■□□□□ 0.46
LRRC8A-202ENST00000372599 SMARCA4P51532 1647 aa17.85■□□□□ 0.45
LRRC8A-202ENST00000372599 DIEXFQ68CQ4 756 aaKnown RBP17.84■□□□□ 0.45
LRRC8A-202ENST00000372599 FAM50AQ14320 339 aaKnown RBP17.83■□□□□ 0.44
LRRC8A-202ENST00000372599 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
LRRC8A-202ENST00000372599 WIZO95785 1651 aa17.82■□□□□ 0.44
LRRC8A-202ENST00000372599 ATAD2BQ9ULI0 1458 aa17.8■□□□□ 0.44
LRRC8A-202ENST00000372599 FBLN2P98095 1184 aa17.79■□□□□ 0.44
LRRC8A-202ENST00000372599 WRNQ14191 1432 aaPredicted RBP eCLIP17.74■□□□□ 0.43
LRRC8A-202ENST00000372599 ARID3CA6NKF2 412 aa17.71■□□□□ 0.43
LRRC8A-202ENST00000372599 CCDC88BA6NC98 1476 aa17.68■□□□□ 0.42
LRRC8A-202ENST00000372599 NCAPD3P42695 1498 aa17.62■□□□□ 0.41
LRRC8A-202ENST00000372599 SOGA1O94964 1423 aa17.59■□□□□ 0.41
LRRC8A-202ENST00000372599 MYT1LQ9UL68 1186 aa17.59■□□□□ 0.41
LRRC8A-202ENST00000372599 ABCC8Q09428 1581 aa17.59■□□□□ 0.41
LRRC8A-202ENST00000372599 NEUROD1Q13562 356 aa17.58■□□□□ 0.41
LRRC8A-202ENST00000372599 SMARCA2P51531 1590 aa17.58■□□□□ 0.4
LRRC8A-202ENST00000372599 CEP162Q5TB80 1403 aa17.57■□□□□ 0.4
LRRC8A-202ENST00000372599 CLIP1P30622 1438 aa17.57■□□□□ 0.4
LRRC8A-202ENST00000372599 NESP48681 1621 aa17.56■□□□□ 0.4
LRRC8A-202ENST00000372599 EEA1Q15075 1411 aa17.55■□□□□ 0.4
LRRC8A-202ENST00000372599 ZNF316A6NFI3 1004 aaPredicted RBP17.54■□□□□ 0.4
LRRC8A-202ENST00000372599 TRIM52Q96A61 297 aa17.53■□□□□ 0.4
LRRC8A-202ENST00000372599 GOLGA3Q08378 1498 aa17.52■□□□□ 0.39
LRRC8A-202ENST00000372599 NEFLP07196 543 aa17.51■□□□□ 0.39
LRRC8A-202ENST00000372599 POLR3GLQ9BT43 218 aa17.5■□□□□ 0.39
LRRC8A-202ENST00000372599 TOP2AP11388 1531 aaKnown RBP17.48■□□□□ 0.39
LRRC8A-202ENST00000372599 TNIKQ9UKE5 1360 aa17.47■□□□□ 0.39
LRRC8A-202ENST00000372599 CNGB1Q14028 1251 aaPredicted RBP17.47■□□□□ 0.39
LRRC8A-202ENST00000372599 GTF3C3Q9Y5Q9 886 aa17.46■□□□□ 0.39
LRRC8A-202ENST00000372599 PEG3Q9GZU2 1588 aa17.46■□□□□ 0.39
LRRC8A-202ENST00000372599 KIF27Q86VH2 1401 aa17.42■□□□□ 0.38
LRRC8A-202ENST00000372599 HMGXB3Q12766 1538 aa17.42■□□□□ 0.38
LRRC8A-202ENST00000372599 CEP164Q9UPV0 1460 aa17.4■□□□□ 0.38
LRRC8A-202ENST00000372599 ZNF777Q9ULD5 760 aaPredicted RBP17.36■□□□□ 0.37
LRRC8A-202ENST00000372599 ACIN1Q9UKV3 1341 aaKnown RBP17.35■□□□□ 0.37
LRRC8A-202ENST00000372599 CUX2O14529 1486 aa17.3■□□□□ 0.36
LRRC8A-202ENST00000372599 CHMP7Q8WUX9 453 aaPredicted RBP17.29■□□□□ 0.36
LRRC8A-202ENST00000372599 RUSC2Q8N2Y8 1516 aa17.27■□□□□ 0.36
LRRC8A-202ENST00000372599 CHIC2Q9UKJ5 165 aa17.27■□□□□ 0.36
LRRC8A-202ENST00000372599 CDK11AQ9UQ88 783 aaPredicted RBP17.27■□□□□ 0.36
LRRC8A-202ENST00000372599 CADPSQ9ULU8 1353 aa17.27■□□□□ 0.35
LRRC8A-202ENST00000372599 ZNF326Q5BKZ1 582 aaKnown RBP17.26■□□□□ 0.35
LRRC8A-202ENST00000372599 ERCC6Q03468 1493 aa17.26■□□□□ 0.35
LRRC8A-202ENST00000372599 MTUS2Q5JR59 1369 aa17.24■□□□□ 0.35
LRRC8A-202ENST00000372599 ERICH6Q7L0X2 663 aa17.24■□□□□ 0.35
LRRC8A-202ENST00000372599 CARMIL1Q5VZK9 1371 aa17.23■□□□□ 0.35
LRRC8A-202ENST00000372599 BCANQ96GW7 911 aa17.18■□□□□ 0.34
LRRC8A-202ENST00000372599 MIER1Q8N108 512 aa17.14■□□□□ 0.33
LRRC8A-202ENST00000372599 TDRD9Q8NDG6 1382 aaKnown RBP17.14■□□□□ 0.33
LRRC8A-202ENST00000372599 SCAF1Q9H7N4 1312 aaKnown RBP17.14■□□□□ 0.33
LRRC8A-202ENST00000372599 ANP32CO43423 234 aa17.13■□□□□ 0.33
LRRC8A-202ENST00000372599 CFTRP13569 1480 aa17.12■□□□□ 0.33
LRRC8A-202ENST00000372599 KANK4Q5T7N3 995 aaPredicted RBP17.11■□□□□ 0.33
LRRC8A-202ENST00000372599 FANCD2Q9BXW9 1451 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms