RNA–Protein interactions for RNA: ENST00000398138.4

RDH16-202, Transcript of retinol dehydrogenase 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDH16, Length 2,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH16-202ENST00000398138 NISCHQ9Y2I1 1504 aa27.26■■□□□ 1.95
RDH16-202ENST00000398138 CCDC180Q9P1Z9 1646 aa23.37■■□□□ 1.33
RDH16-202ENST00000398138 ZCCHC6Q5VYS8 1495 aaKnown RBP23.04■■□□□ 1.28
RDH16-202ENST00000398138 SHROOM4Q9ULL8 1493 aa22.96■■□□□ 1.27
RDH16-202ENST00000398138 DCAF8L2P0C7V8 631 aa22.52■■□□□ 1.2
RDH16-202ENST00000398138 DCAF1Q9Y4B6 1507 aa22.43■■□□□ 1.18
RDH16-202ENST00000398138 SUPT5HO00267 1087 aaKnown RBP22.39■■□□□ 1.18
RDH16-202ENST00000398138 MYO15BQ96JP2 1530 aa21.88■■□□□ 1.09
RDH16-202ENST00000398138 SCRIBQ14160 1630 aa21.78■■□□□ 1.08
RDH16-202ENST00000398138 ABCC9O60706 1549 aa21.71■■□□□ 1.07
RDH16-202ENST00000398138 CHIC1Q5VXU3 224 aa21.69■■□□□ 1.06
RDH16-202ENST00000398138 NACADO15069 1562 aa21.63■■□□□ 1.05
RDH16-202ENST00000398138 RSF1Q96T23 1441 aaPredicted RBP21.45■■□□□ 1.02
RDH16-202ENST00000398138 RB1CC1Q8TDY2 1594 aa21.32■■□□□ 1
RDH16-202ENST00000398138 CECR2Q9BXF3 1484 aa21.22■□□□□ 0.99
RDH16-202ENST00000398138 MROH2BQ7Z745 1585 aa21.15■□□□□ 0.98
RDH16-202ENST00000398138 WIZO95785 1651 aa21.04■□□□□ 0.96
RDH16-202ENST00000398138 LOC105371045A0A1W2PR82 267 aa20.99■□□□□ 0.95
RDH16-202ENST00000398138 BAZ1AQ9NRL2 1556 aaPredicted RBP20.98■□□□□ 0.95
RDH16-202ENST00000398138 UNC13AQ9UPW8 1703 aa20.98■□□□□ 0.95
RDH16-202ENST00000398138 TRIM41Q8WV44 630 aa20.92■□□□□ 0.94
RDH16-202ENST00000398138 SMARCA4P51532 1647 aa20.83■□□□□ 0.92
RDH16-202ENST00000398138 TOP2AP11388 1531 aaKnown RBP20.75■□□□□ 0.91
RDH16-202ENST00000398138 PCGF6Q9BYE7 350 aa20.75■□□□□ 0.91
RDH16-202ENST00000398138 BICRAQ9NZM4 1560 aa20.71■□□□□ 0.91
RDH16-202ENST00000398138 EIF4G1Q04637 1599 aaKnown RBP20.7■□□□□ 0.9
RDH16-202ENST00000398138 FAM9AQ8IZU1 332 aaPredicted RBP20.68■□□□□ 0.9
RDH16-202ENST00000398138 PABPN1Q86U42 306 aaKnown RBP eCLIP20.66■□□□□ 0.9
RDH16-202ENST00000398138 HRCP23327 699 aa20.63■□□□□ 0.89
RDH16-202ENST00000398138 SMARCA2P51531 1590 aa20.61■□□□□ 0.89
RDH16-202ENST00000398138 CCDC88BA6NC98 1476 aa20.6■□□□□ 0.89
RDH16-202ENST00000398138 EHMT2Q96KQ7 1210 aa20.47■□□□□ 0.87
RDH16-202ENST00000398138 TRIM26Q12899 539 aaPredicted RBP20.47■□□□□ 0.87
RDH16-202ENST00000398138 PEG3Q9GZU2 1588 aa20.47■□□□□ 0.87
RDH16-202ENST00000398138 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
RDH16-202ENST00000398138 ATAD2BQ9ULI0 1458 aa20.32■□□□□ 0.84
RDH16-202ENST00000398138 BAZ1BQ9UIG0 1483 aaKnown RBP20.27■□□□□ 0.84
RDH16-202ENST00000398138 SOGA1O94964 1423 aa20.2■□□□□ 0.83
RDH16-202ENST00000398138 PPARGC1BQ86YN6 1023 aaKnown RBP20.17■□□□□ 0.82
RDH16-202ENST00000398138 WRNQ14191 1432 aaPredicted RBP eCLIP20.17■□□□□ 0.82
RDH16-202ENST00000398138 EEA1Q15075 1411 aa20.15■□□□□ 0.82
RDH16-202ENST00000398138 RUSC2Q8N2Y8 1516 aa20.1■□□□□ 0.81
RDH16-202ENST00000398138 SYNJ1O43426 1573 aa20.09■□□□□ 0.81
RDH16-202ENST00000398138 CSRNP3Q8WYN3 585 aa20.07■□□□□ 0.8
RDH16-202ENST00000398138 CEP162Q5TB80 1403 aa20.04■□□□□ 0.8
RDH16-202ENST00000398138 TNIKQ9UKE5 1360 aa20.03■□□□□ 0.8
RDH16-202ENST00000398138 HMGXB3Q12766 1538 aa20■□□□□ 0.79
RDH16-202ENST00000398138 GOLGA3Q08378 1498 aa19.98■□□□□ 0.79
RDH16-202ENST00000398138 NCAPD3P42695 1498 aa19.97■□□□□ 0.79
RDH16-202ENST00000398138 UBTFP17480 764 aaKnown RBP19.95■□□□□ 0.78
RDH16-202ENST00000398138 ZEB1P37275 1124 aaPredicted RBP19.94■□□□□ 0.78
RDH16-202ENST00000398138 CEP164Q9UPV0 1460 aa19.9■□□□□ 0.78
RDH16-202ENST00000398138 KIF21BO75037 1637 aa19.89■□□□□ 0.77
RDH16-202ENST00000398138 TOP2BQ02880 1626 aa19.89■□□□□ 0.77
RDH16-202ENST00000398138 BIVM-ERCC5R4GMW8 1640 aa19.84■□□□□ 0.77
RDH16-202ENST00000398138 TTBK1Q5TCY1 1321 aaPredicted RBP19.77■□□□□ 0.76
RDH16-202ENST00000398138 CFTRP13569 1480 aa19.75■□□□□ 0.75
RDH16-202ENST00000398138 RAPGEF2Q9Y4G8 1499 aa19.75■□□□□ 0.75
RDH16-202ENST00000398138 CLIP1P30622 1438 aa19.72■□□□□ 0.75
RDH16-202ENST00000398138 CUX1P39880 1505 aa19.72■□□□□ 0.75
RDH16-202ENST00000398138 PRDM2Q13029 1718 aa19.66■□□□□ 0.74
RDH16-202ENST00000398138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.65■□□□□ 0.74
RDH16-202ENST00000398138 ERICH3Q5RHP9 1530 aa19.62■□□□□ 0.73
RDH16-202ENST00000398138 VPS8Q8N3P4 1428 aa19.62■□□□□ 0.73
RDH16-202ENST00000398138 CCER1Q8TC90 406 aaPredicted RBP19.62■□□□□ 0.73
RDH16-202ENST00000398138 PRXQ9BXM0 1461 aa19.61■□□□□ 0.73
RDH16-202ENST00000398138 CC2D2AQ9P2K1 1620 aa19.6■□□□□ 0.73
RDH16-202ENST00000398138 KIF27Q86VH2 1401 aa19.58■□□□□ 0.72
RDH16-202ENST00000398138 RANGAP1P46060 587 aaPredicted RBP19.56■□□□□ 0.72
RDH16-202ENST00000398138 CADPSQ9ULU8 1353 aa19.56■□□□□ 0.72
RDH16-202ENST00000398138 APLP2Q06481 763 aa19.49■□□□□ 0.71
RDH16-202ENST00000398138 ARAP1Q96P48 1450 aa19.44■□□□□ 0.7
RDH16-202ENST00000398138 CUX2O14529 1486 aa19.43■□□□□ 0.7
RDH16-202ENST00000398138 FGD5Q6ZNL6 1462 aa19.41■□□□□ 0.7
RDH16-202ENST00000398138 FANCD2Q9BXW9 1451 aa19.38■□□□□ 0.69
RDH16-202ENST00000398138 IGF1RP08069 1367 aa19.35■□□□□ 0.69
RDH16-202ENST00000398138 HNRNPUL2Q1KMD3 747 aaKnown RBP19.34■□□□□ 0.69
RDH16-202ENST00000398138 ARHGAP35Q9NRY4 1499 aa19.31■□□□□ 0.68
RDH16-202ENST00000398138 DNMBPQ6XZF7 1577 aa19.29■□□□□ 0.68
RDH16-202ENST00000398138 NESP48681 1621 aa19.28■□□□□ 0.68
RDH16-202ENST00000398138 CARMIL1Q5VZK9 1371 aa19.28■□□□□ 0.68
RDH16-202ENST00000398138 TOPBP1Q92547 1522 aa19.24■□□□□ 0.67
RDH16-202ENST00000398138 KANK4Q5T7N3 995 aaPredicted RBP19.23■□□□□ 0.67
RDH16-202ENST00000398138 POLA1P09884 1462 aaPredicted RBP19.21■□□□□ 0.67
RDH16-202ENST00000398138 RAD54L2Q9Y4B4 1467 aa19.21■□□□□ 0.67
RDH16-202ENST00000398138 ABCA10Q8WWZ4 1543 aa19.2■□□□□ 0.66
RDH16-202ENST00000398138 LAMC3Q9Y6N6 1575 aa19.19■□□□□ 0.66
RDH16-202ENST00000398138 RRBP1Q9P2E9 1410 aaKnown RBP19.12■□□□□ 0.65
RDH16-202ENST00000398138 URB2Q14146 1524 aaKnown RBP19.11■□□□□ 0.65
RDH16-202ENST00000398138 CUL7Q14999 1698 aa19.09■□□□□ 0.65
RDH16-202ENST00000398138 DIEXFQ68CQ4 756 aaKnown RBP19.09■□□□□ 0.65
RDH16-202ENST00000398138 TIAM1Q13009 1591 aa19.08■□□□□ 0.65
RDH16-202ENST00000398138 WDR97A6NE52 1622 aa19.07■□□□□ 0.64
RDH16-202ENST00000398138 MAP3K1Q13233 1512 aa19.06■□□□□ 0.64
RDH16-202ENST00000398138 CCNB3Q8WWL7 1395 aa19.05■□□□□ 0.64
RDH16-202ENST00000398138 PDS5BQ9NTI5 1447 aa19.05■□□□□ 0.64
RDH16-202ENST00000398138 FHAD1B1AJZ9 1412 aa19.04■□□□□ 0.64
RDH16-202ENST00000398138 ZNF316A6NFI3 1004 aaPredicted RBP19.03■□□□□ 0.64
RDH16-202ENST00000398138 DNAJC5BQ9UF47 199 aa19.03■□□□□ 0.64
RDH16-202ENST00000398138 CTTNBP2Q8WZ74 1663 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms