Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KRT6AP02538 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.55□□□□□ -0.24
KRT6AP02538 POM121L4P-202ENST00000427789 1891 ntBASIC13.55□□□□□ -0.24
KRT6AP02538 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
KRT6AP02538 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
KRT6AP02538 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.54□□□□□ -0.24
KRT6AP02538 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.54□□□□□ -0.24
KRT6AP02538 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.54□□□□□ -0.24
KRT6AP02538 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.54□□□□□ -0.24
KRT6AP02538 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.54□□□□□ -0.24
KRT6AP02538 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
KRT6AP02538 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 ZNF493-208ENST00000599461 1769 ntBASIC13.54□□□□□ -0.24
KRT6AP02538 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
KRT6AP02538 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.54□□□□□ -0.24
KRT6AP02538 RCC2P8-201ENST00000502779 1035 ntBASIC13.54□□□□□ -0.24
KRT6AP02538 MARK2P5-201ENST00000507649 634 ntBASIC13.54□□□□□ -0.24
KRT6AP02538 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.54□□□□□ -0.24
KRT6AP02538 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.54□□□□□ -0.24
KRT6AP02538 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.54□□□□□ -0.24
KRT6AP02538 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.54□□□□□ -0.24
KRT6AP02538 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.54□□□□□ -0.24
KRT6AP02538 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.54□□□□□ -0.24
KRT6AP02538 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.54□□□□□ -0.24
KRT6AP02538 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.54□□□□□ -0.24
KRT6AP02538 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.54□□□□□ -0.24
KRT6AP02538 TUBB1P2-201ENST00000422712 1306 ntBASIC13.54□□□□□ -0.24
KRT6AP02538 TUBB1P1-201ENST00000503144 1300 ntBASIC13.54□□□□□ -0.24
KRT6AP02538 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.54□□□□□ -0.24
KRT6AP02538 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.54□□□□□ -0.24
KRT6AP02538 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.54□□□□□ -0.24
KRT6AP02538 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.54□□□□□ -0.24
KRT6AP02538 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 AC073862.5-201ENST00000624129 2027 ntBASIC13.54□□□□□ -0.24
KRT6AP02538 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
KRT6AP02538 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.54□□□□□ -0.24
KRT6AP02538 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
KRT6AP02538 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.54□□□□□ -0.24
KRT6AP02538 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
KRT6AP02538 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRT6AP02538 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
KRT6AP02538 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.53□□□□□ -0.24
KRT6AP02538 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
KRT6AP02538 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC13.53□□□□□ -0.24
KRT6AP02538 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC13.53□□□□□ -0.24
KRT6AP02538 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC13.53□□□□□ -0.24
KRT6AP02538 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.53□□□□□ -0.24
KRT6AP02538 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
KRT6AP02538 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.53□□□□□ -0.24
KRT6AP02538 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRT6AP02538 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.53□□□□□ -0.24
KRT6AP02538 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
KRT6AP02538 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms