Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC13.97□□□□□ -0.17
SMAD6O43541 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMAD6O43541 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC13.97□□□□□ -0.17
SMAD6O43541 MANEA-AS1-201ENST00000564541 2268 ntBASIC13.97□□□□□ -0.17
SMAD6O43541 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMAD6O43541 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SMAD6O43541 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.96□□□□□ -0.17
SMAD6O43541 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.96□□□□□ -0.17
SMAD6O43541 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.96□□□□□ -0.17
SMAD6O43541 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC13.96□□□□□ -0.17
SMAD6O43541 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 AC025271.4-201ENST00000621477 1726 ntBASIC13.96□□□□□ -0.17
SMAD6O43541 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.96□□□□□ -0.17
SMAD6O43541 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 STK16-203ENST00000409516 895 ntTSL 2 BASIC13.96□□□□□ -0.17
SMAD6O43541 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC13.96□□□□□ -0.17
SMAD6O43541 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC13.96□□□□□ -0.17
SMAD6O43541 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SMAD6O43541 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC13.96□□□□□ -0.17
SMAD6O43541 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC13.96□□□□□ -0.17
SMAD6O43541 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC13.96□□□□□ -0.17
SMAD6O43541 MT3-202ENST00000561640 514 ntTSL 3 BASIC13.96□□□□□ -0.17
SMAD6O43541 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC13.96□□□□□ -0.17
SMAD6O43541 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC13.96□□□□□ -0.17
SMAD6O43541 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC13.96□□□□□ -0.17
SMAD6O43541 AC009084.3-201ENST00000623356 437 ntBASIC13.96□□□□□ -0.17
SMAD6O43541 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC13.96□□□□□ -0.17
SMAD6O43541 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.96□□□□□ -0.17
SMAD6O43541 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMAD6O43541 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
SMAD6O43541 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.96□□□□□ -0.18
SMAD6O43541 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
SMAD6O43541 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SMAD6O43541 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SMAD6O43541 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SMAD6O43541 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SMAD6O43541 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SMAD6O43541 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SMAD6O43541 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SMAD6O43541 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SMAD6O43541 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.95□□□□□ -0.18
SMAD6O43541 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SMAD6O43541 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.95□□□□□ -0.18
SMAD6O43541 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SMAD6O43541 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SMAD6O43541 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SMAD6O43541 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
SMAD6O43541 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 ACTBP14-201ENST00000411655 1089 ntBASIC13.95□□□□□ -0.18
SMAD6O43541 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC13.95□□□□□ -0.18
SMAD6O43541 LINP1-201ENST00000417112 917 ntTSL 2 BASIC13.95□□□□□ -0.18
SMAD6O43541 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC13.95□□□□□ -0.18
SMAD6O43541 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC13.95□□□□□ -0.18
SMAD6O43541 HNRNPA1P2-207ENST00000432375 960 ntBASIC13.95□□□□□ -0.18
SMAD6O43541 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC13.95□□□□□ -0.18
SMAD6O43541 GULOP-201ENST00000454030 748 ntBASIC13.95□□□□□ -0.18
SMAD6O43541 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC13.95□□□□□ -0.18
SMAD6O43541 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC13.95□□□□□ -0.18
SMAD6O43541 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SMAD6O43541 AC013553.1-201ENST00000560906 267 ntBASIC13.95□□□□□ -0.18
SMAD6O43541 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC13.95□□□□□ -0.18
SMAD6O43541 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC13.95□□□□□ -0.18
SMAD6O43541 TRMT112P3-201ENST00000580149 358 ntBASIC13.95□□□□□ -0.18
SMAD6O43541 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMAD6O43541 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms