Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 AP001527.2-201ENST00000614441 631 ntBASIC14.2□□□□□ -0.14
CAPN8A6NHC0 AC103691.2-201ENST00000618824 433 ntBASIC14.2□□□□□ -0.14
CAPN8A6NHC0 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.2□□□□□ -0.14
CAPN8A6NHC0 PCDHB18P-202ENST00000526308 3197 ntBASIC14.2□□□□□ -0.14
CAPN8A6NHC0 TBC1D3J-201ENST00000620719 1426 ntBASIC14.2□□□□□ -0.14
CAPN8A6NHC0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN8A6NHC0 AL139158.3-201ENST00000641212 1562 ntBASIC14.2□□□□□ -0.14
CAPN8A6NHC0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CAPN8A6NHC0 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN8A6NHC0 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.2□□□□□ -0.14
CAPN8A6NHC0 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN8A6NHC0 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN8A6NHC0 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN8A6NHC0 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CAPN8A6NHC0 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN8A6NHC0 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CAPN8A6NHC0 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 RCC2P1-201ENST00000452257 1476 ntBASIC14.19□□□□□ -0.14
CAPN8A6NHC0 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 MARK2P16-201ENST00000605714 1723 ntBASIC14.19□□□□□ -0.14
CAPN8A6NHC0 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 MIR645-201ENST00000385283 94 ntBASIC14.19□□□□□ -0.14
CAPN8A6NHC0 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 AK2P2-201ENST00000439142 405 ntBASIC14.19□□□□□ -0.14
CAPN8A6NHC0 DUTP3-201ENST00000450025 415 ntBASIC14.19□□□□□ -0.14
CAPN8A6NHC0 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 AP000358.1-201ENST00000456260 156 ntBASIC14.19□□□□□ -0.14
CAPN8A6NHC0 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 NPM1P43-201ENST00000558669 786 ntBASIC14.19□□□□□ -0.14
CAPN8A6NHC0 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 RN7SL455P-201ENST00000580629 282 ntBASIC14.19□□□□□ -0.14
CAPN8A6NHC0 AC073352.2-201ENST00000609385 439 ntBASIC14.19□□□□□ -0.14
CAPN8A6NHC0 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 AP001065.2-201ENST00000617205 644 ntBASIC14.19□□□□□ -0.14
CAPN8A6NHC0 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 AC006453.1-201ENST00000636037 1257 ntBASIC14.19□□□□□ -0.14
CAPN8A6NHC0 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.19□□□□□ -0.14
CAPN8A6NHC0 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 MIR557-201ENST00000385239 98 ntBASIC14.18□□□□□ -0.14
CAPN8A6NHC0 AL583805.1-201ENST00000391389 531 ntBASIC14.18□□□□□ -0.14
CAPN8A6NHC0 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.18□□□□□ -0.14
CAPN8A6NHC0 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms