Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 AL031595.1-201ENST00000623969 4709 ntBASIC12.83□□□□□ -0.36
CLDN20P56880 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.83□□□□□ -0.36
CLDN20P56880 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CLDN20P56880 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CLDN20P56880 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDN20P56880 FAM90A2P-201ENST00000511144 1395 ntBASIC12.82□□□□□ -0.36
CLDN20P56880 FAM90A25P-201ENST00000528404 1395 ntBASIC12.82□□□□□ -0.36
CLDN20P56880 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDN20P56880 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 AL022323.5-201ENST00000624101 2059 ntBASIC12.82□□□□□ -0.36
CLDN20P56880 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN20P56880 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CLDN20P56880 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN20P56880 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CLDN20P56880 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CLDN20P56880 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN20P56880 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDN20P56880 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.82□□□□□ -0.36
CLDN20P56880 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CLDN20P56880 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDN20P56880 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.82□□□□□ -0.36
CLDN20P56880 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN20P56880 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.82□□□□□ -0.36
CLDN20P56880 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDN20P56880 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDN20P56880 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.82□□□□□ -0.36
CLDN20P56880 CEP164P1-201ENST00000455142 418 ntBASIC12.82□□□□□ -0.36
CLDN20P56880 RN7SL67P-201ENST00000492147 296 ntBASIC12.82□□□□□ -0.36
CLDN20P56880 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN20P56880 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDN20P56880 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDN20P56880 MIR3907-201ENST00000579424 151 ntBASIC12.82□□□□□ -0.36
CLDN20P56880 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDN20P56880 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
CLDN20P56880 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDN20P56880 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN20P56880 AC106872.11-201ENST00000605838 421 ntBASIC12.82□□□□□ -0.36
CLDN20P56880 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CLDN20P56880 AC015967.2-201ENST00000624092 234 ntBASIC12.82□□□□□ -0.36
CLDN20P56880 AC006435.4-201ENST00000625037 234 ntBASIC12.82□□□□□ -0.36
CLDN20P56880 AL356737.1-201ENST00000634391 234 ntBASIC12.82□□□□□ -0.36
CLDN20P56880 AC006453.1-201ENST00000636037 1257 ntBASIC12.82□□□□□ -0.36
CLDN20P56880 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CLDN20P56880 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CLDN20P56880 AC007952.5-201ENST00000572818 1486 ntBASIC12.82□□□□□ -0.36
CLDN20P56880 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDN20P56880 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 DLX4-206ENST00000611342 1662 ntBASIC12.82□□□□□ -0.36
CLDN20P56880 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN20P56880 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDN20P56880 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CLDN20P56880 AC106818.1-201ENST00000623223 3242 ntBASIC12.82□□□□□ -0.36
CLDN20P56880 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CLDN20P56880 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN20P56880 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDN20P56880 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN20P56880 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN20P56880 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDN20P56880 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CLDN20P56880 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDN20P56880 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CLDN20P56880 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDN20P56880 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDN20P56880 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN20P56880 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms