Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GPC3P51654 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.31■□□□□ 0.04
GPC3P51654 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GPC3P51654 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
GPC3P51654 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
GPC3P51654 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.3■□□□□ 0.04
GPC3P51654 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
GPC3P51654 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GPC3P51654 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
GPC3P51654 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
GPC3P51654 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
GPC3P51654 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GPC3P51654 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
GPC3P51654 MIR1307-201ENST00000408840 149 ntBASIC15.3■□□□□ 0.04
GPC3P51654 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
GPC3P51654 AC005722.1-201ENST00000431878 964 ntBASIC15.3■□□□□ 0.04
GPC3P51654 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15.3■□□□□ 0.04
GPC3P51654 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.3■□□□□ 0.04
GPC3P51654 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15.3■□□□□ 0.04
GPC3P51654 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC15.3■□□□□ 0.04
GPC3P51654 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.3■□□□□ 0.04
GPC3P51654 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC15.3■□□□□ 0.04
GPC3P51654 AC026410.1-201ENST00000507366 1101 ntBASIC15.3■□□□□ 0.04
GPC3P51654 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC15.3■□□□□ 0.04
GPC3P51654 COX5A-205ENST00000568517 582 ntTSL 3 BASIC15.3■□□□□ 0.04
GPC3P51654 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC15.3■□□□□ 0.04
GPC3P51654 MIR4472-1-201ENST00000584349 80 ntBASIC15.3■□□□□ 0.04
GPC3P51654 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.3■□□□□ 0.04
GPC3P51654 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.3■□□□□ 0.04
GPC3P51654 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 AC011471.3-201ENST00000623576 402 ntBASIC15.3■□□□□ 0.04
GPC3P51654 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC15.3■□□□□ 0.04
GPC3P51654 AL139424.3-202ENST00000641619 917 ntBASIC15.3■□□□□ 0.04
GPC3P51654 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
GPC3P51654 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GPC3P51654 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
GPC3P51654 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC3P51654 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
GPC3P51654 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC3P51654 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.29■□□□□ 0.04
GPC3P51654 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC3P51654 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC3P51654 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GPC3P51654 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.29■□□□□ 0.04
GPC3P51654 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC3P51654 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GPC3P51654 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC3P51654 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC3P51654 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC3P51654 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
GPC3P51654 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GPC3P51654 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC3P51654 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC3P51654 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GPC3P51654 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GPC3P51654 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC3P51654 AC093909.3-201ENST00000504783 336 ntBASIC15.29■□□□□ 0.04
GPC3P51654 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC15.29■□□□□ 0.04
GPC3P51654 RPS23-207ENST00000511844 530 ntTSL 2 BASIC15.29■□□□□ 0.04
GPC3P51654 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC15.29■□□□□ 0.04
GPC3P51654 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GPC3P51654 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC15.29■□□□□ 0.04
GPC3P51654 RN7SL556P-201ENST00000582856 298 ntBASIC15.29■□□□□ 0.04
GPC3P51654 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC15.29■□□□□ 0.04
GPC3P51654 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC3P51654 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GPC3P51654 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
GPC3P51654 CICP4-201ENST00000447359 2812 ntBASIC15.29■□□□□ 0.04
GPC3P51654 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GPC3P51654 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GPC3P51654 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC15.29■□□□□ 0.04
GPC3P51654 MARK2P9-201ENST00000430958 1727 ntBASIC15.29■□□□□ 0.04
GPC3P51654 AC093462.1-201ENST00000621167 1683 ntBASIC15.28■□□□□ 0.04
GPC3P51654 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.28■□□□□ 0.04
GPC3P51654 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.28■□□□□ 0.04
GPC3P51654 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC3P51654 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GPC3P51654 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC3P51654 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.28■□□□□ 0.04
GPC3P51654 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms