Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AL805961.1-203ENST00000641078 1258 ntBASIC14.22□□□□□ -0.13
FDFT1P37268 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.22□□□□□ -0.13
FDFT1P37268 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 DLX4-206ENST00000611342 1662 ntBASIC14.22□□□□□ -0.13
FDFT1P37268 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
FDFT1P37268 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.22□□□□□ -0.13
FDFT1P37268 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
FDFT1P37268 AC026271.4-201ENST00000578214 1833 ntBASIC14.22□□□□□ -0.13
FDFT1P37268 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
FDFT1P37268 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
FDFT1P37268 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
FDFT1P37268 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
FDFT1P37268 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.21□□□□□ -0.13
FDFT1P37268 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 AL445209.1-201ENST00000607269 3491 ntBASIC14.21□□□□□ -0.13
FDFT1P37268 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.21□□□□□ -0.13
FDFT1P37268 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.21□□□□□ -0.13
FDFT1P37268 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.21□□□□□ -0.13
FDFT1P37268 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.21□□□□□ -0.13
FDFT1P37268 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC14.21□□□□□ -0.13
FDFT1P37268 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC14.21□□□□□ -0.13
FDFT1P37268 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC14.21□□□□□ -0.13
FDFT1P37268 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.21□□□□□ -0.13
FDFT1P37268 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.21□□□□□ -0.13
FDFT1P37268 AC007279.1-201ENST00000448547 837 ntBASIC14.21□□□□□ -0.13
FDFT1P37268 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.21□□□□□ -0.13
FDFT1P37268 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.21□□□□□ -0.13
FDFT1P37268 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.21□□□□□ -0.13
FDFT1P37268 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.21□□□□□ -0.13
FDFT1P37268 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.21□□□□□ -0.13
FDFT1P37268 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC14.21□□□□□ -0.13
FDFT1P37268 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.21□□□□□ -0.13
FDFT1P37268 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.21□□□□□ -0.13
FDFT1P37268 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FDFT1P37268 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.21□□□□□ -0.14
FDFT1P37268 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.21□□□□□ -0.14
FDFT1P37268 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
FDFT1P37268 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
FDFT1P37268 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
FDFT1P37268 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.21□□□□□ -0.14
FDFT1P37268 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
FDFT1P37268 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
FDFT1P37268 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.21□□□□□ -0.14
FDFT1P37268 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
FDFT1P37268 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
FDFT1P37268 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.2□□□□□ -0.14
FDFT1P37268 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC14.2□□□□□ -0.14
FDFT1P37268 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
FDFT1P37268 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 AP002761.4-201ENST00000565433 3361 ntBASIC14.2□□□□□ -0.14
FDFT1P37268 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.2□□□□□ -0.14
FDFT1P37268 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.2□□□□□ -0.14
FDFT1P37268 AC125807.2-201ENST00000513358 3514 ntBASIC14.2□□□□□ -0.14
FDFT1P37268 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.2□□□□□ -0.14
FDFT1P37268 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
FDFT1P37268 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.2□□□□□ -0.14
FDFT1P37268 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
FDFT1P37268 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC14.2□□□□□ -0.14
FDFT1P37268 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.2□□□□□ -0.14
FDFT1P37268 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
FDFT1P37268 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.2□□□□□ -0.14
FDFT1P37268 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms