Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 MROH4P-201ENST00000431302 1578 ntBASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 AC026271.1-201ENST00000447794 1348 ntBASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 LINC00552-201ENST00000625151 2579 ntBASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 DLX4-206ENST00000611342 1662 ntBASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 SOD1-202ENST00000389995 865 ntTSL 3 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 IL6RP1-201ENST00000417848 1273 ntBASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 ALMS1P1-201ENST00000428767 921 ntBASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 AL161932.2-201ENST00000435436 679 ntBASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 RN7SL148P-201ENST00000467120 279 ntBASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 CAP2-207ENST00000493172 861 ntTSL 2 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 PDLIM1P1-201ENST00000604187 969 ntBASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 AC006213.4-201ENST00000616184 634 ntBASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO4Q2I0M5 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.33□□□□□ -0.27
RSPO4Q2I0M5 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RSPO4Q2I0M5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.27
RSPO4Q2I0M5 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RSPO4Q2I0M5 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
RSPO4Q2I0M5 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
RSPO4Q2I0M5 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
RSPO4Q2I0M5 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO4Q2I0M5 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC13.33□□□□□ -0.28
RSPO4Q2I0M5 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO4Q2I0M5 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.33□□□□□ -0.28
RSPO4Q2I0M5 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO4Q2I0M5 AC023908.3-201ENST00000564211 3047 ntBASIC13.33□□□□□ -0.28
RSPO4Q2I0M5 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms