Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.267e-8■□□□□ 11
U2AF2P26368 SCAMP3-209ENST00000497470 845 ntTSL 522.65■■□□□ 1.227e-8■□□□□ 11
U2AF2P26368 GARS-203ENST00000454308 814 ntTSL 522.52■■□□□ 1.22e-8■□□□□ 11
U2AF2P26368 SCAMP3-204ENST00000465312 715 ntTSL 520.95■□□□□ 0.947e-8■□□□□ 11
U2AF2P26368 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.87e-8■□□□□ 11
U2AF2P26368 LRSAM1-208ENST00000486587 827 ntTSL 319.83■□□□□ 0.777e-8■□□□□ 11
U2AF2P26368 LRSAM1-207ENST00000485704 413 ntTSL 518.96■□□□□ 0.637e-8■□□□□ 11
U2AF2P26368 PRPSAP1-202ENST00000423915 549 ntTSL 418.31■□□□□ 0.527e-8■□□□□ 11
U2AF2P26368 RNF7-203ENST00000477012 1036 ntTSL 1 (best)18.15■□□□□ 0.57e-8■□□□□ 11
U2AF2P26368 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.427e-8■□□□□ 11
U2AF2P26368 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.397e-8■□□□□ 11
U2AF2P26368 SCAMP3-208ENST00000490999 1011 ntTSL 216.69■□□□□ 0.267e-8■□□□□ 11
U2AF2P26368 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC16.58■□□□□ 0.257e-8■□□□□ 11
U2AF2P26368 RNF7-204ENST00000477393 862 ntTSL 216.47■□□□□ 0.237e-8■□□□□ 11
U2AF2P26368 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.137e-8■□□□□ 11
U2AF2P26368 PPP2R5E-207ENST00000556878 3371 ntTSL 1 (best)15.58■□□□□ 0.087e-8■□□□□ 11
U2AF2P26368 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.25■□□□□ 0.037e-8■□□□□ 11
U2AF2P26368 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.027e-8■□□□□ 11
U2AF2P26368 PRMT5-219ENST00000555530 837 ntTSL 514.92□□□□□ -0.027e-8■□□□□ 11
U2AF2P26368 SEC31B-209ENST00000485800 2217 ntTSL 514.89□□□□□ -0.037e-8■□□□□ 11
U2AF2P26368 TTLL3-203ENST00000414814 549 ntTSL 514.88□□□□□ -0.037e-8■□□□□ 11
U2AF2P26368 TTLL3-212ENST00000430718 536 ntTSL 414.88□□□□□ -0.037e-8■□□□□ 11
U2AF2P26368 TTLL3-205ENST00000418745 540 ntTSL 414.62□□□□□ -0.077e-8■□□□□ 11
U2AF2P26368 RNF7-205ENST00000480908 782 ntTSL 4 BASIC14.18□□□□□ -0.147e-8■□□□□ 11
U2AF2P26368 RNF7-202ENST00000393000 805 ntTSL 2 BASIC14.1□□□□□ -0.157e-8■□□□□ 11
U2AF2P26368 TTLL3-204ENST00000417065 565 ntTSL 413.32□□□□□ -0.287e-8■□□□□ 11
U2AF2P26368 TTLL3-207ENST00000422738 545 ntTSL 413.32□□□□□ -0.287e-8■□□□□ 11
U2AF2P26368 TTLL3-222ENST00000459758 555 ntTSL 413.32□□□□□ -0.287e-8■□□□□ 11
U2AF2P26368 SCAMP3-203ENST00000462151 819 ntTSL 513.13□□□□□ -0.317e-8■□□□□ 11
U2AF2P26368 ERV3-1-202ENST00000528878 1729 ntTSL 212.93□□□□□ -0.347e-8■□□□□ 11
U2AF2P26368 SEC31B-211ENST00000492667 2920 ntTSL 212.62□□□□□ -0.397e-8■□□□□ 11
U2AF2P26368 TTLL3-206ENST00000419081 591 ntTSL 512.57□□□□□ -0.47e-8■□□□□ 11
U2AF2P26368 TTLL3-208ENST00000426827 756 ntTSL 412.57□□□□□ -0.47e-8■□□□□ 11
U2AF2P26368 SEC31B-203ENST00000469546 4396 ntTSL 512.4□□□□□ -0.427e-8■□□□□ 11
U2AF2P26368 SEC31B-205ENST00000479697 5087 ntTSL 1 (best)12.06□□□□□ -0.487e-8■□□□□ 11
U2AF2P26368 TTLL3-219ENST00000452597 603 ntTSL 412.02□□□□□ -0.497e-8■□□□□ 11
U2AF2P26368 ING4-218ENST00000619641 1280 ntTSL 1 (best) BASIC11.81□□□□□ -0.527e-8■□□□□ 11
U2AF2P26368 SEC31B-201ENST00000370345 4612 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.547e-8■□□□□ 11
U2AF2P26368 ACTR2-201ENST00000260641 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.577e-8■□□□□ 11
U2AF2P26368 SCAMP3-206ENST00000478737 649 ntTSL 311.23□□□□□ -0.617e-8■□□□□ 11
U2AF2P26368 SEC31B-202ENST00000462434 4849 ntTSL 511.13□□□□□ -0.637e-8■□□□□ 11
U2AF2P26368 SCAMP3-205ENST00000472397 1030 ntTSL 311.01□□□□□ -0.657e-8■□□□□ 11
U2AF2P26368 SEC31B-207ENST00000482456 3916 ntTSL 510.9□□□□□ -0.667e-8■□□□□ 11
U2AF2P26368 TTLL3-217ENST00000439814 497 ntTSL 410.6□□□□□ -0.717e-8■□□□□ 11
U2AF2P26368 USP13-203ENST00000496897 2747 ntTSL 2 BASIC10.31□□□□□ -0.767e-8■□□□□ 11
U2AF2P26368 ERV3-1-203ENST00000535538 358 ntTSL 39.7□□□□□ -0.867e-8■□□□□ 11
U2AF2P26368 SARS-204ENST00000471705 851 ntTSL 28.15□□□□□ -1.17e-8■□□□□ 11
U2AF2P26368 UGP2-220ENST00000487640 566 ntTSL 48.15□□□□□ -1.17e-8■□□□□ 11
U2AF2P26368 TTLL3-216ENST00000438596 540 ntTSL 58.04□□□□□ -1.127e-8■□□□□ 11
U2AF2P26368 PRPSAP1-209ENST00000494662 572 ntTSL 26.98□□□□□ -1.297e-8■□□□□ 11
U2AF2P26368 USP13-204ENST00000497155 899 ntTSL 35.28□□□□□ -1.567e-8■□□□□ 11
U2AF2P26368 MTHFD1L-205ENST00000421497 373 ntTSL 34.69□□□□□ -1.667e-8■□□□□ 11
U2AF2P26368 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.2□□□□□ -1.747e-8■□□□□ 11
U2AF2P26368 PGM3-209ENST00000509219 753 ntTSL 53.98□□□□□ -1.777e-8■□□□□ 11
U2AF2P26368 ETAA1-202ENST00000462772 520 ntTSL 20.6□□□□□ -2.317e-8■□□□□ 11
U2AF2P26368 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.221e-7■□□□□ 11
U2AF2P26368 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC16.41■□□□□ 0.221e-7■□□□□ 11
U2AF2P26368 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC15.71■□□□□ 0.111e-7■□□□□ 11
U2AF2P26368 DYNC1I2-205ENST00000409453 2552 ntTSL 5 BASIC12.14□□□□□ -0.471e-7■□□□□ 11
U2AF2P26368 DYNC1I2-224ENST00000482454 2590 ntTSL 1 (best)8.67□□□□□ -1.021e-7■□□□□ 11
U2AF2P26368 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.11□□□□□ -1.271e-7■□□□□ 11
U2AF2P26368 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.381e-7■□□□□ 11
U2AF2P26368 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.41e-7■□□□□ 11
U2AF2P26368 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.25□□□□□ -1.411e-7■□□□□ 11
U2AF2P26368 SCAP-203ENST00000416208 1222 ntTSL 521.05■□□□□ 0.965e-6■□□□□ 11
U2AF2P26368 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.675e-6■□□□□ 11
U2AF2P26368 SCAP-202ENST00000320017 3430 ntTSL 218.42■□□□□ 0.545e-6■□□□□ 11
U2AF2P26368 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18■□□□□ 0.475e-6■□□□□ 11
U2AF2P26368 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.48■□□□□ 0.395e-6■□□□□ 11
U2AF2P26368 SCAP-207ENST00000441517 3748 ntTSL 217.48■□□□□ 0.395e-6■□□□□ 11
U2AF2P26368 AP1G2-226ENST00000556843 562 ntTSL 415.76■□□□□ 0.115e-6■□□□□ 11
U2AF2P26368 SCAP-210ENST00000468965 570 ntTSL 214.96□□□□□ -0.015e-6■□□□□ 11
U2AF2P26368 AP1G2-209ENST00000554069 755 ntTSL 314.1□□□□□ -0.155e-6■□□□□ 11
U2AF2P26368 CCDC84-203ENST00000526463 1295 ntTSL 1 (best)23.22■■□□□ 1.316e-7■□□□□ 11
U2AF2P26368 CCDC84-202ENST00000524670 885 ntTSL 519.5■□□□□ 0.716e-7■□□□□ 11
U2AF2P26368 CCDC84-206ENST00000532132 1119 ntTSL 1 (best)19.34■□□□□ 0.696e-7■□□□□ 11
U2AF2P26368 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.546e-7■□□□□ 11
U2AF2P26368 CCDC84-209ENST00000580556 562 ntTSL 313.85□□□□□ -0.196e-7■□□□□ 11
U2AF2P26368 CCDC84-205ENST00000528088 1482 ntTSL 212.41□□□□□ -0.426e-7■□□□□ 11
U2AF2P26368 TAF1D-205ENST00000526015 1735 ntTSL 1 (best)21.03■□□□□ 0.966e-10■□□□□ 11
U2AF2P26368 TAF1D-201ENST00000323981 2540 ntTSL 216.05■□□□□ 0.166e-10■□□□□ 11
U2AF2P26368 VARS2-209ENST00000477288 6054 ntTSL 220.62■□□□□ 0.895e-7■□□□□ 11
U2AF2P26368 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.885e-7■□□□□ 11
U2AF2P26368 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.13■□□□□ 0.815e-7■□□□□ 11
U2AF2P26368 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.08■□□□□ 0.645e-7■□□□□ 11
U2AF2P26368 MYL6-204ENST00000546630 544 ntTSL 1 (best)16.67■□□□□ 0.265e-7■□□□□ 11
U2AF2P26368 MYL6-216ENST00000550184 1564 ntTSL 516.59■□□□□ 0.255e-7■□□□□ 11
U2AF2P26368 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.195e-7■□□□□ 11
U2AF2P26368 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.035e-7■□□□□ 11
U2AF2P26368 MYL6-210ENST00000548400 573 ntTSL 3 BASIC14.6□□□□□ -0.075e-7■□□□□ 11
U2AF2P26368 MYL6-215ENST00000549566 685 ntTSL 2 BASIC14.3□□□□□ -0.125e-7■□□□□ 11
U2AF2P26368 MYL6-208ENST00000547703 675 ntTSL 513.83□□□□□ -0.25e-7■□□□□ 11
U2AF2P26368 MYL6-212ENST00000548725 582 ntTSL 213.31□□□□□ -0.285e-7■□□□□ 11
U2AF2P26368 MYL6-206ENST00000547408 683 ntTSL 3 BASIC10.74□□□□□ -0.695e-7■□□□□ 11
U2AF2P26368 MYL6-217ENST00000550639 419 ntTSL 510.74□□□□□ -0.695e-7■□□□□ 11
U2AF2P26368 MYL6-214ENST00000549392 411 ntTSL 510.65□□□□□ -0.75e-7■□□□□ 11
U2AF2P26368 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC9.55□□□□□ -0.885e-7■□□□□ 11
U2AF2P26368 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.885e-7■□□□□ 11
U2AF2P26368 MYL6-211ENST00000548580 528 ntTSL 2 BASIC8.52□□□□□ -1.055e-7■□□□□ 11
U2AF2P26368 MYL6-221ENST00000552297 454 ntTSL 36.99□□□□□ -1.295e-7■□□□□ 11
Retrieved 100 of 36,523 protein–RNA pairs in 280.8 ms