RNA–Protein interactions for RNA: ENST00000497155.1

USP13-204, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 899 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-204ENST00000497155 AEBP2Q6ZN18 517 aaPredicted RBP24.95■■□□□ 1.58
USP13-204ENST00000497155 CHIC1Q5VXU3 224 aa23.76■■□□□ 1.39
USP13-204ENST00000497155 SENP3Q9H4L4 574 aaPredicted RBP21.13■□□□□ 0.97
USP13-204ENST00000497155 PHF23Q9BUL5 403 aaPredicted RBP20.94■□□□□ 0.94
USP13-204ENST00000497155 FOXD1Q16676 465 aa19.76■□□□□ 0.75
USP13-204ENST00000497155 PLPPR3Q6T4P5 718 aa19.01■□□□□ 0.63
USP13-204ENST00000497155 PPP6R1Q9UPN7 881 aa18.63■□□□□ 0.57
USP13-204ENST00000497155 ADRA2BP18089 450 aa18.57■□□□□ 0.56
USP13-204ENST00000497155 PIAS4Q8N2W9 510 aaPredicted RBP18.47■□□□□ 0.55
USP13-204ENST00000497155 MSH5O43196 834 aa18.34■□□□□ 0.53
USP13-204ENST00000497155 POTEDQ86YR6 584 aa17.73■□□□□ 0.43
USP13-204ENST00000497155 MAPK8IP2Q13387 824 aaPredicted RBP17.04■□□□□ 0.32
USP13-204ENST00000497155 SCAF1Q9H7N4 1312 aaKnown RBP16.85■□□□□ 0.29
USP13-204ENST00000497155 DMRT2Q9Y5R5 561 aa16.81■□□□□ 0.28
USP13-204ENST00000497155 PPP4R3CPQ6ZMV5 832 aa16.74■□□□□ 0.27
USP13-204ENST00000497155 CNKSR2Q8WXI2 1034 aa16.35■□□□□ 0.21
USP13-204ENST00000497155 HOXD11P31277 338 aaPredicted RBP16.25■□□□□ 0.19
USP13-204ENST00000497155 DCAF8L1A6NGE4 600 aa16.15■□□□□ 0.18
USP13-204ENST00000497155 RNF216Q9NWF9 866 aaPredicted RBP16.15■□□□□ 0.18
USP13-204ENST00000497155 NCBP3Q53F19 620 aaKnown RBP16.05■□□□□ 0.16
USP13-204ENST00000497155 NPM3O75607 178 aaKnown RBP15.91■□□□□ 0.14
USP13-204ENST00000497155 KCNA4P22459 653 aa15.77■□□□□ 0.12
USP13-204ENST00000497155 RNF39Q9H2S5 420 aa15.71■□□□□ 0.11
USP13-204ENST00000497155 CACNB1Q02641 598 aaPredicted RBP15.7■□□□□ 0.1
USP13-204ENST00000497155 DNAJC5BQ9UF47 199 aa15.57■□□□□ 0.08
USP13-204ENST00000497155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.48■□□□□ 0.078e-7■■■□□ 18.5
USP13-204ENST00000497155 C1QBPQ07021 282 aaKnown RBP15.43■□□□□ 0.06
USP13-204ENST00000497155 U3KPZ7 1027 aaPredicted RBP15.22■□□□□ 0.03
USP13-204ENST00000497155 SLC4A2P04920 1241 aa15.18■□□□□ 0.02
USP13-204ENST00000497155 SPINK5Q9NQ38 1064 aaPredicted RBP14.98□□□□□ -0.01
USP13-204ENST00000497155 CAPN15O75808 1086 aa14.9□□□□□ -0.02
USP13-204ENST00000497155 SLC4A1APQ9BWU0 796 aaKnown RBP14.87□□□□□ -0.03
USP13-204ENST00000497155 DSG3P32926 999 aa14.78□□□□□ -0.04
USP13-204ENST00000497155 TRHP20396 242 aaPredicted RBP14.72□□□□□ -0.05
USP13-204ENST00000497155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.71□□□□□ -0.05
USP13-204ENST00000497155 HNRNPUL2Q1KMD3 747 aaKnown RBP14.71□□□□□ -0.05
USP13-204ENST00000497155 MYCNP04198 464 aaPredicted RBP14.67□□□□□ -0.06
USP13-204ENST00000497155 SAMD1Q6SPF0 538 aaPredicted RBP14.67□□□□□ -0.06
USP13-204ENST00000497155 APLP2Q06481 763 aa14.66□□□□□ -0.06
USP13-204ENST00000497155 ABCB7O75027 752 aa14.62□□□□□ -0.07
USP13-204ENST00000497155 ZNF219Q9P2Y4 722 aaPredicted RBP14.62□□□□□ -0.07
USP13-204ENST00000497155 FOXD4L1Q9NU39 408 aa14.61□□□□□ -0.07
USP13-204ENST00000497155 ZBTB22O15209 634 aa14.53□□□□□ -0.08
USP13-204ENST00000497155 ATF5Q9Y2D1 282 aaPredicted RBP14.43□□□□□ -0.1
USP13-204ENST00000497155 POLA2Q14181 598 aa14.34□□□□□ -0.11
USP13-204ENST00000497155 ATXN8OSP0DMR3 200 aa14.09□□□□□ -0.15
USP13-204ENST00000497155 RBM42Q9BTD8 480 aaKnown RBP14.02□□□□□ -0.17
USP13-204ENST00000497155 CSRNP3Q8WYN3 585 aa13.98□□□□□ -0.17
USP13-204ENST00000497155 ZBTB12Q9Y330 459 aaPredicted RBP13.96□□□□□ -0.17
USP13-204ENST00000497155 POTEHQ6S545 545 aa13.91□□□□□ -0.18
USP13-204ENST00000497155 OSCARQ8IYS5 282 aa13.9□□□□□ -0.18
USP13-204ENST00000497155 EHMT2Q96KQ7 1210 aa13.88□□□□□ -0.19
USP13-204ENST00000497155 AKT1S1Q96B36 256 aa13.76□□□□□ -0.21
USP13-204ENST00000497155 MKRN4PQ13434 485 aaPredicted RBP13.74□□□□□ -0.21
USP13-204ENST00000497155 FBLN2P98095 1184 aa13.72□□□□□ -0.21
USP13-204ENST00000497155 CHRDL2Q6WN34 429 aa13.71□□□□□ -0.21
USP13-204ENST00000497155 REM2Q8IYK8 340 aaPredicted RBP13.67□□□□□ -0.22
USP13-204ENST00000497155 SPDYE2BA6NHP3 402 aa13.59□□□□□ -0.23
USP13-204ENST00000497155 SPDYE6P0CI01 402 aa13.59□□□□□ -0.23
USP13-204ENST00000497155 SPDYE2Q495Y8 402 aa13.59□□□□□ -0.23
USP13-204ENST00000497155 PITPNM1O00562 1244 aa13.54□□□□□ -0.24
USP13-204ENST00000497155 ZNF692Q9BU19 519 aaPredicted RBP13.48□□□□□ -0.25
USP13-204ENST00000497155 SSUH2Q9Y2M2 353 aa13.46□□□□□ -0.25
USP13-204ENST00000497155 PIP4P2Q8N4L2 257 aa13.45□□□□□ -0.26
USP13-204ENST00000497155 FXR2P51116 673 aaKnown RBP eCLIP13.37□□□□□ -0.27
USP13-204ENST00000497155 CLEC11AQ9Y240 323 aa13.35□□□□□ -0.27
USP13-204ENST00000497155 PABPN1Q86U42 306 aaKnown RBP eCLIP13.31□□□□□ -0.28
USP13-204ENST00000497155 SPDYE1Q8NFV5 336 aaPredicted RBP13.31□□□□□ -0.28
USP13-204ENST00000497155 PRKAR2AP13861 404 aaKnown RBP13.18□□□□□ -0.3
USP13-204ENST00000497155 HAX1O00165 279 aa13.14□□□□□ -0.31
USP13-204ENST00000497155 SPDYE4A6NLX3 237 aa13.12□□□□□ -0.31
USP13-204ENST00000497155 CHADLQ6NUI6 762 aa13.12□□□□□ -0.31
USP13-204ENST00000497155 PRR29P0C7W0 189 aa13.11□□□□□ -0.31
USP13-204ENST00000497155 SP7Q8TDD2 431 aaPredicted RBP13.1□□□□□ -0.31
USP13-204ENST00000497155 EVX2Q03828 476 aa13.07□□□□□ -0.32
USP13-204ENST00000497155 C19orf67A6NJJ6 358 aa12.94□□□□□ -0.34
USP13-204ENST00000497155 STAG3Q9UJ98 1225 aa12.88□□□□□ -0.35
USP13-204ENST00000497155 FARP1Q9Y4F1 1045 aaPredicted RBP12.87□□□□□ -0.35
USP13-204ENST00000497155 CREBZFQ9NS37 354 aa12.86□□□□□ -0.35
USP13-204ENST00000497155 PROM2Q8N271 834 aa12.81□□□□□ -0.36
USP13-204ENST00000497155 CD44P16070 742 aaKnown RBP12.77□□□□□ -0.37
USP13-204ENST00000497155 GABBR2O75899 941 aa12.73□□□□□ -0.37
USP13-204ENST00000497155 MNX1P50219 401 aaPredicted RBP12.66□□□□□ -0.38
USP13-204ENST00000497155 FKBP8Q14318 412 aa12.66□□□□□ -0.38
USP13-204ENST00000497155 ZRANB1Q9UGI0 708 aa12.62□□□□□ -0.39
USP13-204ENST00000497155 NPM1P06748 294 aaKnown RBP eCLIP12.55□□□□□ -0.4
USP13-204ENST00000497155 ZNF579Q8NAF0 562 aaKnown RBP12.55□□□□□ -0.4
USP13-204ENST00000497155 POTEIP0CG38 1075 aa12.5□□□□□ -0.41
USP13-204ENST00000497155 PHF12Q96QT6 1004 aa12.49□□□□□ -0.41
USP13-204ENST00000497155 PAK3O75914 559 aaPredicted RBP12.48□□□□□ -0.41
USP13-204ENST00000497155 MIER1Q8N108 512 aa12.48□□□□□ -0.41
USP13-204ENST00000497155 GALR2O43603 387 aaPredicted RBP12.46□□□□□ -0.41
USP13-204ENST00000497155 CLCN6P51797 869 aa12.44□□□□□ -0.42
USP13-204ENST00000497155 TSPYL2Q9H2G4 693 aaPredicted RBP12.41□□□□□ -0.42
USP13-204ENST00000497155 PLCD3Q8N3E9 789 aa12.4□□□□□ -0.42
USP13-204ENST00000497155 PLEKHG5O94827 1062 aa12.39□□□□□ -0.43
USP13-204ENST00000497155 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
USP13-204ENST00000497155 RASEFQ8IZ41 740 aa12.35□□□□□ -0.43
USP13-204ENST00000497155 CCDC61Q9Y6R9 512 aa12.33□□□□□ -0.44
USP13-204ENST00000497155 MS4A3Q96HJ5 214 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms