Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.99□□□□□ -0.49
CD40P25942 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
CD40P25942 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD40P25942 KRT8P24-201ENST00000560290 1559 ntBASIC11.99□□□□□ -0.49
CD40P25942 NRADDP-202ENST00000641269 1585 ntBASIC11.99□□□□□ -0.49
CD40P25942 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC11.99□□□□□ -0.49
CD40P25942 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC11.99□□□□□ -0.49
CD40P25942 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD40P25942 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC11.99□□□□□ -0.49
CD40P25942 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC11.99□□□□□ -0.49
CD40P25942 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD40P25942 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD40P25942 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD40P25942 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD40P25942 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CD40P25942 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD40P25942 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD40P25942 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD40P25942 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CD40P25942 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC11.98□□□□□ -0.49
CD40P25942 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.98□□□□□ -0.49
CD40P25942 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC11.98□□□□□ -0.49
CD40P25942 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC11.98□□□□□ -0.49
CD40P25942 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC11.98□□□□□ -0.49
CD40P25942 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CD40P25942 ACTBP14-201ENST00000411655 1089 ntBASIC11.98□□□□□ -0.49
CD40P25942 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC11.98□□□□□ -0.49
CD40P25942 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CD40P25942 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC11.98□□□□□ -0.49
CD40P25942 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC11.98□□□□□ -0.49
CD40P25942 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC11.98□□□□□ -0.49
CD40P25942 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC11.98□□□□□ -0.49
CD40P25942 MIR4472-1-201ENST00000584349 80 ntBASIC11.98□□□□□ -0.49
CD40P25942 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC11.98□□□□□ -0.49
CD40P25942 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC11.98□□□□□ -0.49
CD40P25942 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
CD40P25942 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC11.98□□□□□ -0.49
CD40P25942 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.98□□□□□ -0.49
CD40P25942 UCKL1-AS1-201ENST00000623569 3602 ntBASIC11.98□□□□□ -0.49
CD40P25942 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD40P25942 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.97□□□□□ -0.49
CD40P25942 AL009178.2-201ENST00000597278 2719 ntBASIC11.97□□□□□ -0.49
CD40P25942 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC11.97□□□□□ -0.49
CD40P25942 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CD40P25942 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.97□□□□□ -0.49
CD40P25942 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CD40P25942 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CD40P25942 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CD40P25942 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CD40P25942 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CD40P25942 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC11.97□□□□□ -0.49
CD40P25942 FUCA1P1-201ENST00000374476 1351 ntBASIC11.97□□□□□ -0.49
CD40P25942 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CD40P25942 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD40P25942 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms